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The map label for this gene is alsB [C]

Identifier: 13471677

GI number: 13471677

Start: 1440312

End: 1441337

Strand: Reverse

Name: alsB [C]

Synonym: mll1725

Alternate gene names: 13471677

Gene position: 1441337-1440312 (Counterclockwise)

Preceding gene: 13471678

Following gene: 13471676

Centisome position: 20.48

GC content: 65.11

Gene sequence:

>1026_bases
ATGAGACTGATCAAGACACTTATGGCCGCCGCAACGGCGCTCGCCATTACCGCCTTCGTGGCGCCGACTTTCGCCGCCGA
CGATCCGGGCCCGGCGGCCTACGCACAGGCGCTCAAGGGCAAGCGCGTCATGCTGGTGCCGCTGGCGATGGGCTTCGACC
TGGCGCAGGGCTGGGCGCACTATCTGAAGAAGGAGGTCGAGGCCTGGGGCGGCACGTTCGAGACGCGCGATCCGAACTGG
GTGGTCGATGCCGGCGCGCAGGCGATCACCGACGCCATCTCGTCGGACACCAGGCCCGACGTGCTGATCATCCACGCGCC
GGACCTCAACTCCTATTCCAAGCTGATGAAGAAGGCGCAGGCCGCCGGCACCTATGTGCTTCTGGTCGACAACCCCGCCA
ACTTCCCGGCCGACGCCTTTGTCGGCAGCGACTGGGACCGGCTGGGCCAGCTCGAGGCCGAAGCGGCGATCAAGGGCTGC
GGTGAAAACTCGTCGAAGAAGATCGGGCTGGTGCAGGGCGACCAGGCGAACTCCTCCAGCCTCTACCAGTATGCCGGCAT
CATGAAGGTGCTGGACAAGCATCCCGACTTCAAGGTGGTCGCCAAGCCCGACTCCAACTGGGATGCGACGACCTCGCGCA
ATGTGACGACGACGATGCTGCAGCAGAACCCGGACATCTGCTCGATCATCGATTTCTGGGACGGTGACGCCACCGGCGCA
TCGGCCGCGATCCGCGACGCCAAGCTCGACGGCAAGGTGTTCCTGGTCACCACAGGCGGCGGTGAAAAAGCCGCCGATTG
CGACAAGCTTCAGGACGGCACCTACGGGGCCGTGGTGATGACCGAGCTTGCCCGCCAGTCGGGCGACATGAACGCCATCA
TCAAGTTCCTGCTGCAGAGCGGCCAGCCGGCCGGCACCTCGCACACCTACATCTACACGCTGGAGAAGGCGACGACCAAG
GCCGACCTCAAGCCCGACAGCTGCTGGGATCTGAAGGCGCTGCAGGCCGAAGCGGCGGCGAAGTAA

Upstream 100 bases:

>100_bases
AGGGCGACATTTAGAGCGGATGGGCTAGCCCATCTTGCTTGGGGTACCCGGCGTGATCGCGACGATCGGCCGGCAATGAA
ACCGAACCAGAGGACGTGAC

Downstream 100 bases:

>100_bases
GCCGCGCGGTCGAATAGACTCCACGAGGTGGCCGGATCCAGTTCGGCCACCTCTTTCTCTTGATCAACGGCAGCCAATGT
CCTTTCGCGAACGCCTGCAG

Product: binding protein component of sugar ABC transporter

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRLIKTLMAAATALAITAFVAPTFAADDPGPAAYAQALKGKRVMLVPLAMGFDLAQGWAHYLKKEVEAWGGTFETRDPNW
VVDAGAQAITDAISSDTRPDVLIIHAPDLNSYSKLMKKAQAAGTYVLLVDNPANFPADAFVGSDWDRLGQLEAEAAIKGC
GENSSKKIGLVQGDQANSSSLYQYAGIMKVLDKHPDFKVVAKPDSNWDATTSRNVTTTMLQQNPDICSIIDFWDGDATGA
SAAIRDAKLDGKVFLVTTGGGEKAADCDKLQDGTYGAVVMTELARQSGDMNAIIKFLLQSGQPAGTSHTYIYTLEKATTK
ADLKPDSCWDLKALQAEAAAK

Sequences:

>Translated_341_residues
MRLIKTLMAAATALAITAFVAPTFAADDPGPAAYAQALKGKRVMLVPLAMGFDLAQGWAHYLKKEVEAWGGTFETRDPNW
VVDAGAQAITDAISSDTRPDVLIIHAPDLNSYSKLMKKAQAAGTYVLLVDNPANFPADAFVGSDWDRLGQLEAEAAIKGC
GENSSKKIGLVQGDQANSSSLYQYAGIMKVLDKHPDFKVVAKPDSNWDATTSRNVTTTMLQQNPDICSIIDFWDGDATGA
SAAIRDAKLDGKVFLVTTGGGEKAADCDKLQDGTYGAVVMTELARQSGDMNAIIKFLLQSGQPAGTSHTYIYTLEKATTK
ADLKPDSCWDLKALQAEAAAK
>Mature_341_residues
MRLIKTLMAAATALAITAFVAPTFAADDPGPAAYAQALKGKRVMLVPLAMGFDLAQGWAHYLKKEVEAWGGTFETRDPNW
VVDAGAQAITDAISSDTRPDVLIIHAPDLNSYSKLMKKAQAAGTYVLLVDNPANFPADAFVGSDWDRLGQLEAEAAIKGC
GENSSKKIGLVQGDQANSSSLYQYAGIMKVLDKHPDFKVVAKPDSNWDATTSRNVTTTMLQQNPDICSIIDFWDGDATGA
SAAIRDAKLDGKVFLVTTGGGEKAADCDKLQDGTYGAVVMTELARQSGDMNAIIKFLLQSGQPAGTSHTYIYTLEKATTK
ADLKPDSCWDLKALQAEAAAK

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36359; Mature: 36359

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIKTLMAAATALAITAFVAPTFAADDPGPAAYAQALKGKRVMLVPLAMGFDLAQGWAH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHH
YLKKEVEAWGGTFETRDPNWVVDAGAQAITDAISSDTRPDVLIIHAPDLNSYSKLMKKAQ
HHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH
AAGTYVLLVDNPANFPADAFVGSDWDRLGQLEAEAAIKGCGENSSKKIGLVQGDQANSSS
HCCEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCH
LYQYAGIMKVLDKHPDFKVVAKPDSNWDATTSRNVTTTMLQQNPDICSIIDFWDGDATGA
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCEEEEEECCCCCCCCC
SAAIRDAKLDGKVFLVTTGGGEKAADCDKLQDGTYGAVVMTELARQSGDMNAIIKFLLQS
HHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
GQPAGTSHTYIYTLEKATTKADLKPDSCWDLKALQAEAAAK
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRLIKTLMAAATALAITAFVAPTFAADDPGPAAYAQALKGKRVMLVPLAMGFDLAQGWAH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHH
YLKKEVEAWGGTFETRDPNWVVDAGAQAITDAISSDTRPDVLIIHAPDLNSYSKLMKKAQ
HHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH
AAGTYVLLVDNPANFPADAFVGSDWDRLGQLEAEAAIKGCGENSSKKIGLVQGDQANSSS
HCCEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCH
LYQYAGIMKVLDKHPDFKVVAKPDSNWDATTSRNVTTTMLQQNPDICSIIDFWDGDATGA
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEHHHCCCCEEEEEECCCCCCCCC
SAAIRDAKLDGKVFLVTTGGGEKAADCDKLQDGTYGAVVMTELARQSGDMNAIIKFLLQS
HHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
GQPAGTSHTYIYTLEKATTKADLKPDSCWDLKALQAEAAAK
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA