| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471665
Identifier: 13471665
GI number: 13471665
Start: 1426459
End: 1427454
Strand: Direct
Name: 13471665
Synonym: mlr1707
Alternate gene names: NA
Gene position: 1426459-1427454 (Clockwise)
Preceding gene: 13471664
Following gene: 13471666
Centisome position: 20.27
GC content: 67.97
Gene sequence:
>996_bases ATGAACGACATCCGCGAGGCGGCGCTTGCGACGCTAGCGCCCCCGCCCGACCGCCACGGCGAATTCGACGCGCATTTCCG CGCCTATTTCTACAACGGCACCAAGCCTTCGATCGAAGGCGAAAAGGACGACGAAACCCGCATCAAGGACGATCGCGGCA CGCGCGAGGAAGAAGATCAGACTGTCCGCAAGGAGGAAGGTGGCGAGCTATCCTCCGCACTGGAACAGTTGAGCACACGC GACTTCCAGCGCGACGACGACAGGCTGGCCGCCTTTCGCCGAAAACTGTCCTCCGCTCTCCCCGCCCGCCGCTCTTTCCG CACCGTGCGCACCCCTTCGCGTGGCAAGCTCGACCTGCGCCGCTCGCTCAGGGAAATCGTCAGCGCCGACGGTGACGTGC CCTCGCCGCTGCTGCGCCGCCGCCAGACCGTGCCGCGCAAGCTGCTGCTCTTGATCGACGTCTCCGGCTCGATGAAGCTG CACACGGCGGACTATCTCAAGCTGGCGCATGCCGCCGTGCAAGGTGCTGACCGCGCCGAGATCTTTACCTTCGGCACGCG GCTCACCCGCATCACCTCGGCGCTGCGCATCCGCGACCGCAACCAGGCGCTGGCCCGCGCGGCGGCGCAGGTCGATGACT GGGACGGCGGCACGCGCATGGGGCCGACACTGCTTGCCTTCCTCTCCGTTCCGCGCTTCTCGTCCTTCGCGCGTGGAGCA GCGGTCGTCATCCTGTCCGACGCGCTGGAGCGCGGCGACCATGCCGAACTGGAGACAGCGATGCGCAGGCTGAGCGCCCG CGCCTTCCGGCTGTCGCTGGCCACGCCCTTGGCCGGCGACCCGCGCTTCCGGCCGGCAACGGCGGCGCTGCGCGCCATCC TGCCTGACCTCGACGACCTCATCGACGGCTCGTCGCTGACCAGCCTGACCGATTTCATCCTGTCGCTCGCCCGCCCTGCC CCCACGGCTTCGACAATCTGGAAAAGGGTATCGTGA
Upstream 100 bases:
>100_bases CTTCGGCTTCGCGAGGCTGCTTCGCCATCACGCCTTCCCCATCGCCCCCGAGCAGGTCACCGGCTTCATGAAAGCCGTGA CGCTTCTGGGCCCCCGCTCG
Downstream 100 bases:
>100_bases TGCAGAAAGCCATCGACGCGCATTTCCACATCTGGCGGCAGAAGGACCAGCCTTGGCTGGTGGGGCCAATGGTGCCGCGC ATCTTCGGCCCCTACGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase E Protein; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; CoxE Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MNDIREAALATLAPPPDRHGEFDAHFRAYFYNGTKPSIEGEKDDETRIKDDRGTREEEDQTVRKEEGGELSSALEQLSTR DFQRDDDRLAAFRRKLSSALPARRSFRTVRTPSRGKLDLRRSLREIVSADGDVPSPLLRRRQTVPRKLLLLIDVSGSMKL HTADYLKLAHAAVQGADRAEIFTFGTRLTRITSALRIRDRNQALARAAAQVDDWDGGTRMGPTLLAFLSVPRFSSFARGA AVVILSDALERGDHAELETAMRRLSARAFRLSLATPLAGDPRFRPATAALRAILPDLDDLIDGSSLTSLTDFILSLARPA PTASTIWKRVS
Sequences:
>Translated_331_residues MNDIREAALATLAPPPDRHGEFDAHFRAYFYNGTKPSIEGEKDDETRIKDDRGTREEEDQTVRKEEGGELSSALEQLSTR DFQRDDDRLAAFRRKLSSALPARRSFRTVRTPSRGKLDLRRSLREIVSADGDVPSPLLRRRQTVPRKLLLLIDVSGSMKL HTADYLKLAHAAVQGADRAEIFTFGTRLTRITSALRIRDRNQALARAAAQVDDWDGGTRMGPTLLAFLSVPRFSSFARGA AVVILSDALERGDHAELETAMRRLSARAFRLSLATPLAGDPRFRPATAALRAILPDLDDLIDGSSLTSLTDFILSLARPA PTASTIWKRVS >Mature_331_residues MNDIREAALATLAPPPDRHGEFDAHFRAYFYNGTKPSIEGEKDDETRIKDDRGTREEEDQTVRKEEGGELSSALEQLSTR DFQRDDDRLAAFRRKLSSALPARRSFRTVRTPSRGKLDLRRSLREIVSADGDVPSPLLRRRQTVPRKLLLLIDVSGSMKL HTADYLKLAHAAVQGADRAEIFTFGTRLTRITSALRIRDRNQALARAAAQVDDWDGGTRMGPTLLAFLSVPRFSSFARGA AVVILSDALERGDHAELETAMRRLSARAFRLSLATPLAGDPRFRPATAALRAILPDLDDLIDGSSLTSLTDFILSLARPA PTASTIWKRVS
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36745; Mature: 36745
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIREAALATLAPPPDRHGEFDAHFRAYFYNGTKPSIEGEKDDETRIKDDRGTREEEDQ CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCHHHH TVRKEEGGELSSALEQLSTRDFQRDDDRLAAFRRKLSSALPARRSFRTVRTPSRGKLDLR HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHH RSLREIVSADGDVPSPLLRRRQTVPRKLLLLIDVSGSMKLHTADYLKLAHAAVQGADRAE HHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCHHH IFTFGTRLTRITSALRIRDRNQALARAAAQVDDWDGGTRMGPTLLAFLSVPRFSSFARGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCCC AVVILSDALERGDHAELETAMRRLSARAFRLSLATPLAGDPRFRPATAALRAILPDLDDL EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHH IDGSSLTSLTDFILSLARPAPTASTIWKRVS HCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MNDIREAALATLAPPPDRHGEFDAHFRAYFYNGTKPSIEGEKDDETRIKDDRGTREEEDQ CCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCHHHH TVRKEEGGELSSALEQLSTRDFQRDDDRLAAFRRKLSSALPARRSFRTVRTPSRGKLDLR HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHH RSLREIVSADGDVPSPLLRRRQTVPRKLLLLIDVSGSMKLHTADYLKLAHAAVQGADRAE HHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHCCCCHHH IFTFGTRLTRITSALRIRDRNQALARAAAQVDDWDGGTRMGPTLLAFLSVPRFSSFARGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHCCC AVVILSDALERGDHAELETAMRRLSARAFRLSLATPLAGDPRFRPATAALRAILPDLDDL EEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHH IDGSSLTSLTDFILSLARPAPTASTIWKRVS HCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA