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The map label for this gene is yieP [H]

Identifier: 13471654

GI number: 13471654

Start: 1415583

End: 1416365

Strand: Reverse

Name: yieP [H]

Synonym: mll1690

Alternate gene names: 13471654

Gene position: 1416365-1415583 (Counterclockwise)

Preceding gene: 13471655

Following gene: 13471652

Centisome position: 20.13

GC content: 66.79

Gene sequence:

>783_bases
ATGCCCCAGGACAAGGCAAAGAAACAAGCCAGCCGGGCCAAGGCGCAAGCCAGCCGCGATCCGGCGGTCGTGCGCAGGGC
GGATGCGGCGCACTTTCCCGGGTCCAGTGTTCATGCCTCGCTCGCCAGCGAGATAGGTCTGCGGATTGTGCGCGGCGACT
ATCCGCCCGGCAGCATCCTGCCCAACGAGGCCAAATGGGCCGAGACGTTCAACGTCAGCCGCTCGGCGGTGCGCGAGGCG
ATCAAGATGCTGATGGCCAAGAGCCTTTTGGCATCACGTCCCAAGATCGGCAGCTGGGTCGAACCGAAGGAGCGCTGGAA
CCTGCTCGACCGCGACGTGCTTGCCTGGTACGCGACCGCACCCGACCGTGAAGCCTTCCTGCGCACCGTGCAGGAGTTCC
GCCACATCATCGAGCCGGAAGCATCCGCCTTTGCCGCCATGCGGCGCAGCGACGAGCAGATGGCCGAGATCAGCCTGGCT
TGCCGTGAGATGGGGGAGGCGGCGAACCTGCCGGAACGCATCCGTGCCGACACGCGCTTCCACCTCGCCATCCTGCGGGC
CTCGGGCAACGACCTTCTGGTGCCGCTCGGCGTGCTGATCGAGTCCGCACTCGACCACCTCTTCGTCTTCACGACACGGC
AGGTCGGCGACCAGAACCGGGCGCAGAAACTGCACGAGGCGATCGAGAAGAACATCCGCCTGCAACGGCCGGCGGCGGCG
CGCAATGCCGTGCACAAGCTGCTCGCCGACACCGATGAGGGGATCGGAAGCCGGCGGCGGTAG

Upstream 100 bases:

>100_bases
TTGACGCGTCCGTGGTTTGGATTTTTCGGTGACGGGATCGGCGCGACACAGGGTTCGGAGCATCTCCGGGCGACGGGCGG
CCGACCCTATTGGAACGTGG

Downstream 100 bases:

>100_bases
CCGTCCGGCCGTCAGAGCAATTCCAGGAAAAGTGTGAGACGGTTTTCCCGGGAAAGCGCGTGGCGCTTTCCCGAGGGAAT
TGCGTCAAAATAAAGAGTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPQDKAKKQASRAKAQASRDPAVVRRADAAHFPGSSVHASLASEIGLRIVRGDYPPGSILPNEAKWAETFNVSRSAVREA
IKMLMAKSLLASRPKIGSWVEPKERWNLLDRDVLAWYATAPDREAFLRTVQEFRHIIEPEASAFAAMRRSDEQMAEISLA
CREMGEAANLPERIRADTRFHLAILRASGNDLLVPLGVLIESALDHLFVFTTRQVGDQNRAQKLHEAIEKNIRLQRPAAA
RNAVHKLLADTDEGIGSRRR

Sequences:

>Translated_260_residues
MPQDKAKKQASRAKAQASRDPAVVRRADAAHFPGSSVHASLASEIGLRIVRGDYPPGSILPNEAKWAETFNVSRSAVREA
IKMLMAKSLLASRPKIGSWVEPKERWNLLDRDVLAWYATAPDREAFLRTVQEFRHIIEPEASAFAAMRRSDEQMAEISLA
CREMGEAANLPERIRADTRFHLAILRASGNDLLVPLGVLIESALDHLFVFTTRQVGDQNRAQKLHEAIEKNIRLQRPAAA
RNAVHKLLADTDEGIGSRRR
>Mature_259_residues
PQDKAKKQASRAKAQASRDPAVVRRADAAHFPGSSVHASLASEIGLRIVRGDYPPGSILPNEAKWAETFNVSRSAVREAI
KMLMAKSLLASRPKIGSWVEPKERWNLLDRDVLAWYATAPDREAFLRTVQEFRHIIEPEASAFAAMRRSDEQMAEISLAC
REMGEAANLPERIRADTRFHLAILRASGNDLLVPLGVLIESALDHLFVFTTRQVGDQNRAQKLHEAIEKNIRLQRPAAAR
NAVHKLLADTDEGIGSRRR

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=222, Percent_Identity=35.5855855855856, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI48994955, Length=213, Percent_Identity=35.6807511737089, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786303, Length=224, Percent_Identity=26.7857142857143, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 29011; Mature: 28880

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQDKAKKQASRAKAQASRDPAVVRRADAAHFPGSSVHASLASEIGLRIVRGDYPPGSIL
CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCC
PNEAKWAETFNVSRSAVREAIKMLMAKSLLASRPKIGSWVEPKERWNLLDRDVLAWYATA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHCCC
PDREAFLRTVQEFRHIIEPEASAFAAMRRSDEQMAEISLACREMGEAANLPERIRADTRF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCE
HLAILRASGNDLLVPLGVLIESALDHLFVFTTRQVGDQNRAQKLHEAIEKNIRLQRPAAA
EEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHH
RNAVHKLLADTDEGIGSRRR
HHHHHHHHHHCHHCCCCCCC
>Mature Secondary Structure 
PQDKAKKQASRAKAQASRDPAVVRRADAAHFPGSSVHASLASEIGLRIVRGDYPPGSIL
CCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCC
PNEAKWAETFNVSRSAVREAIKMLMAKSLLASRPKIGSWVEPKERWNLLDRDVLAWYATA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHCCC
PDREAFLRTVQEFRHIIEPEASAFAAMRRSDEQMAEISLACREMGEAANLPERIRADTRF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCE
HLAILRASGNDLLVPLGVLIESALDHLFVFTTRQVGDQNRAQKLHEAIEKNIRLQRPAAA
EEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHH
RNAVHKLLADTDEGIGSRRR
HHHHHHHHHHCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]