Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471623

Identifier: 13471623

GI number: 13471623

Start: 1368617

End: 1369009

Strand: Direct

Name: 13471623

Synonym: mlr1652

Alternate gene names: NA

Gene position: 1368617-1369009 (Clockwise)

Preceding gene: 13471621

Following gene: 13471626

Centisome position: 19.45

GC content: 62.6

Gene sequence:

>393_bases
ATGAAGCTTTTTGAAGGCCTCTCCAGATACCAGCCGCAAGCGCTCGGCGTGCTGCGTATCATGACCGCGCTGCAATTCGT
CGAACATGGCAGCCAGAAACTGTTCAACTTCCCCGCCAGCGCCGAGCCTCACGTCCTCACCGGGCTAACGACGGCCGCCG
GCATCCTCGAATTCGCCGGCGGCATCCTGCTGGCGCTCGGCCTGTTCACCCGCCCGGTCGCGTTCCTTCTGGCCGGCGAG
ATGGCGATCGCCTATTTCATGGCGCACTACCCGCGCGATTTCTTCCCCGTCAACAACAGCGGCGATTCGGCAATCTCCTT
CTGCTTCATCTTCCTCTATCTGGTCTTCGCCGGCGCCGGCGCCTTTGCGCTGGACAATCGCGGCAAGGCCTGA

Upstream 100 bases:

>100_bases
TTCCAATCACCGATTGTTGATGGCGCGCCATGGGAAGTGAATGGTCCATCGCCGGGCAACAATCTATGGCCGAACCGGGA
GGGTGAAAATGGAGTTTTAG

Downstream 100 bases:

>100_bases
TGTCCCCGCGGGGGTGAGCTTTCACCCCCGCATCCGCTCGAAATTCGCATCGAACAGTGGTGTTGCCTGTATGCGCGCCG
CATGGCGCTTGCCTAGCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAGGILLALGLFTRPVAFLLAGE
MAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAGAFALDNRGKA

Sequences:

>Translated_130_residues
MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAGGILLALGLFTRPVAFLLAGE
MAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAGAFALDNRGKA
>Mature_130_residues
MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAGGILLALGLFTRPVAFLLAGE
MAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAGAFALDNRGKA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14057; Mature: 14057

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAG
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
GILLALGLFTRPVAFLLAGEMAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
AFALDNRGKA
CEECCCCCCC
>Mature Secondary Structure
MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAG
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
GILLALGLFTRPVAFLLAGEMAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
AFALDNRGKA
CEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]