| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471623
Identifier: 13471623
GI number: 13471623
Start: 1368617
End: 1369009
Strand: Direct
Name: 13471623
Synonym: mlr1652
Alternate gene names: NA
Gene position: 1368617-1369009 (Clockwise)
Preceding gene: 13471621
Following gene: 13471626
Centisome position: 19.45
GC content: 62.6
Gene sequence:
>393_bases ATGAAGCTTTTTGAAGGCCTCTCCAGATACCAGCCGCAAGCGCTCGGCGTGCTGCGTATCATGACCGCGCTGCAATTCGT CGAACATGGCAGCCAGAAACTGTTCAACTTCCCCGCCAGCGCCGAGCCTCACGTCCTCACCGGGCTAACGACGGCCGCCG GCATCCTCGAATTCGCCGGCGGCATCCTGCTGGCGCTCGGCCTGTTCACCCGCCCGGTCGCGTTCCTTCTGGCCGGCGAG ATGGCGATCGCCTATTTCATGGCGCACTACCCGCGCGATTTCTTCCCCGTCAACAACAGCGGCGATTCGGCAATCTCCTT CTGCTTCATCTTCCTCTATCTGGTCTTCGCCGGCGCCGGCGCCTTTGCGCTGGACAATCGCGGCAAGGCCTGA
Upstream 100 bases:
>100_bases TTCCAATCACCGATTGTTGATGGCGCGCCATGGGAAGTGAATGGTCCATCGCCGGGCAACAATCTATGGCCGAACCGGGA GGGTGAAAATGGAGTTTTAG
Downstream 100 bases:
>100_bases TGTCCCCGCGGGGGTGAGCTTTCACCCCCGCATCCGCTCGAAATTCGCATCGAACAGTGGTGTTGCCTGTATGCGCGCCG CATGGCGCTTGCCTAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAGGILLALGLFTRPVAFLLAGE MAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAGAFALDNRGKA
Sequences:
>Translated_130_residues MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAGGILLALGLFTRPVAFLLAGE MAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAGAFALDNRGKA >Mature_130_residues MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAGGILLALGLFTRPVAFLLAGE MAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAGAFALDNRGKA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 14057; Mature: 14057
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAG CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GILLALGLFTRPVAFLLAGEMAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC AFALDNRGKA CEECCCCCCC >Mature Secondary Structure MKLFEGLSRYQPQALGVLRIMTALQFVEHGSQKLFNFPASAEPHVLTGLTTAAGILEFAG CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH GILLALGLFTRPVAFLLAGEMAIAYFMAHYPRDFFPVNNSGDSAISFCFIFLYLVFAGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC AFALDNRGKA CEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]