Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is ydfG [H]

Identifier: 13471615

GI number: 13471615

Start: 1361417

End: 1361875

Strand: Reverse

Name: ydfG [H]

Synonym: mll1641

Alternate gene names: 13471615

Gene position: 1361875-1361417 (Counterclockwise)

Preceding gene: 13471616

Following gene: 13471614

Centisome position: 19.36

GC content: 62.09

Gene sequence:

>459_bases
ATGAAACAGAGGATGCAGTTTTTCGCCAAGGCGCCGGAGATCATGAAGGCGGTATCGGCACTCAACAAGGCCGTCGACGA
ATGCGGGCTGGAGATCAGCCTGCTGCACCTGATCAAGCTCAGGGCCTCGCAGATCAATGGCTGTTCCTTCTGCGTCGAAA
TGCACAGCCGCGAGGCGCGGCGCGACGGCGAAACCGAGCAGCGGCTCTATCTCGTCGCGGCCTGGAAGGAATCGCCGCTG
TTTTCCGAACGCGAGCGCGCCGCCTTCGCCTGGACCGAGGCGGTGACCCTGATCGCCAACAATGGCGTATCGGACGAGCT
CTATGCCCGCACGCTTGAGCATTTCTCGGAAGAGGAACTGGTCAAGCTGTCCGTCGCCCTCGGCATGATCAACACCTGGA
ACCGGCTGTGCGTCCCGTTCCAGGCCATTCATCCGATGCCGGCCGCCAAGGCTGCCTGA

Upstream 100 bases:

>100_bases
ATCCGCGATCCTTTGCCGCCAGCTGCGCTTTCGTGGCGCGCCACCAGCGGCCGCAGAAATCCAGTTCAACCCCTCAAAAG
CAAATGTGAAAGGACATCAG

Downstream 100 bases:

>100_bases
TATTTCCATAGCCATGAGAGCGCCGTCGAGGAGGCGGCGCTCCCATTGTTTTCAAAGGGAGTGTTTCATGCCTGCCGATT
TGCCATCGACCTTGTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKQRMQFFAKAPEIMKAVSALNKAVDECGLEISLLHLIKLRASQINGCSFCVEMHSREARRDGETEQRLYLVAAWKESPL
FSERERAAFAWTEAVTLIANNGVSDELYARTLEHFSEEELVKLSVALGMINTWNRLCVPFQAIHPMPAAKAA

Sequences:

>Translated_152_residues
MKQRMQFFAKAPEIMKAVSALNKAVDECGLEISLLHLIKLRASQINGCSFCVEMHSREARRDGETEQRLYLVAAWKESPL
FSERERAAFAWTEAVTLIANNGVSDELYARTLEHFSEEELVKLSVALGMINTWNRLCVPFQAIHPMPAAKAA
>Mature_152_residues
MKQRMQFFAKAPEIMKAVSALNKAVDECGLEISLLHLIKLRASQINGCSFCVEMHSREARRDGETEQRLYLVAAWKESPL
FSERERAAFAWTEAVTLIANNGVSDELYARTLEHFSEEELVKLSVALGMINTWNRLCVPFQAIHPMPAAKAA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788050, Length=154, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 17140; Mature: 17140

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRMQFFAKAPEIMKAVSALNKAVDECGLEISLLHLIKLRASQINGCSFCVEMHSREAR
CCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RDGETEQRLYLVAAWKESPLFSERERAAFAWTEAVTLIANNGVSDELYARTLEHFSEEEL
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
VKLSVALGMINTWNRLCVPFQAIHPMPAAKAA
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
>Mature Secondary Structure
MKQRMQFFAKAPEIMKAVSALNKAVDECGLEISLLHLIKLRASQINGCSFCVEMHSREAR
CCHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RDGETEQRLYLVAAWKESPLFSERERAAFAWTEAVTLIANNGVSDELYARTLEHFSEEEL
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
VKLSVALGMINTWNRLCVPFQAIHPMPAAKAA
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]