| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is tam
Identifier: 13471589
GI number: 13471589
Start: 1336172
End: 1336942
Strand: Reverse
Name: tam
Synonym: mll1606
Alternate gene names: 13471589
Gene position: 1336942-1336172 (Counterclockwise)
Preceding gene: 13471590
Following gene: 13471588
Centisome position: 19.0
GC content: 63.94
Gene sequence:
>771_bases ATGGCTGACTGGTCCGCCGCTCAATATCTGAAATTCGAGGATGAGCGCACGCGGCCGGCACGCGATCTGGTCGCGCAAGT GCCGGTCGATTTTCCGCGCCGGGTCGTCGACATAGGCTGCGGGCCTGGCAATTCGACCGAGCTTCTGGTCCAGCGTTGGC CGGATGCGCAGGTGAGTGGCTTCGACACCTCGCCCGACATGATCGAGAAGGCGAGGGTGCGCCTGCCCAATGTCAGCTTC GACCTTGCGGACGCGTCGACATGGCAGCCGGCCGAACCGGTCAATGTGATCTTCGCCAACGCGGTGTTCCAGTGGCTGCC CACGCATCCGGCGGTGTTCCAGCGGCTGATGGGCTTTCTGGCGCCCGGTGGCGCGCTGGCCGTCCAGATGCCCGATAACC TGCTTGAGCCCTCGCATCAAATGATGCGGGATACCGCCGCCGAAATGCCGTTCGCCGACAAGCTCAAGGGTGCGGCGCGC GGCCCGTTGCCGCCGGTCTCGTTCTATTATGACCTGATGTCGCCGCTCGCCGACCGGCTGGACATCTGGCATACGGCCTA CAACCATCCCCTGGCCGACGCCGAGGCGATCGTCGAATGGGTGAAATCGACGGGGCTGAAGCCGTTCCTCGATCCGCTGG ACGCCGATGAGCGCAAGATGTTCCTCGACAGCTATACGGCCAAGATCGCCAAGGCCTATCCGAAGACCGCCGACGGCAAG GTGTTGCTGCGCTTCCCTCGCATCTTCATTGTCGCCAAGAGGGCTGGCTAG
Upstream 100 bases:
>100_bases GGCGCCGAGGCGGCGGCCCCGCATCGCATGACGCACAAGCGGCTGACGCGGTAGGGGATCGTCAGGGCGGTGAATTCTCA AAGCCACATGGGGAGTTCAA
Downstream 100 bases:
>100_bases GATATGTTGATATTCAGGTGATGCCGGCCCGCAAATGGCTGATACCTGCGCTTCCCCGTTCTACTGCGTCGTAGTAGAAC TGAGCTCACGTACGAAAGTA
Product: trans-aconitate methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MADWSAAQYLKFEDERTRPARDLVAQVPVDFPRRVVDIGCGPGNSTELLVQRWPDAQVSGFDTSPDMIEKARVRLPNVSF DLADASTWQPAEPVNVIFANAVFQWLPTHPAVFQRLMGFLAPGGALAVQMPDNLLEPSHQMMRDTAAEMPFADKLKGAAR GPLPPVSFYYDLMSPLADRLDIWHTAYNHPLADAEAIVEWVKSTGLKPFLDPLDADERKMFLDSYTAKIAKAYPKTADGK VLLRFPRIFIVAKRAG
Sequences:
>Translated_256_residues MADWSAAQYLKFEDERTRPARDLVAQVPVDFPRRVVDIGCGPGNSTELLVQRWPDAQVSGFDTSPDMIEKARVRLPNVSF DLADASTWQPAEPVNVIFANAVFQWLPTHPAVFQRLMGFLAPGGALAVQMPDNLLEPSHQMMRDTAAEMPFADKLKGAAR GPLPPVSFYYDLMSPLADRLDIWHTAYNHPLADAEAIVEWVKSTGLKPFLDPLDADERKMFLDSYTAKIAKAYPKTADGK VLLRFPRIFIVAKRAG >Mature_255_residues ADWSAAQYLKFEDERTRPARDLVAQVPVDFPRRVVDIGCGPGNSTELLVQRWPDAQVSGFDTSPDMIEKARVRLPNVSFD LADASTWQPAEPVNVIFANAVFQWLPTHPAVFQRLMGFLAPGGALAVQMPDNLLEPSHQMMRDTAAEMPFADKLKGAARG PLPPVSFYYDLMSPLADRLDIWHTAYNHPLADAEAIVEWVKSTGLKPFLDPLDADERKMFLDSYTAKIAKAYPKTADGKV LLRFPRIFIVAKRAG
Specific function: Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate
COG id: COG4106
COG function: function code R; Trans-aconitate methyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Tam family
Homologues:
Organism=Escherichia coli, GI1787798, Length=254, Percent_Identity=47.6377952755905, Blast_Score=256, Evalue=1e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAM_RHILO (Q98K73)
Other databases:
- EMBL: BA000012 - RefSeq: NP_103155.1 - ProteinModelPortal: Q98K73 - SMR: Q98K73 - GeneID: 1225818 - GenomeReviews: BA000012_GR - KEGG: mlo:mll1606 - NMPDR: fig|266835.1.peg.1260 - HOGENOM: HBG328684 - OMA: WETTYVH - BRENDA: 2.1.1.144 - GO: GO:0005737 - HAMAP: MF_00560 - InterPro: IPR013216 - InterPro: IPR023149
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.144
Molecular weight: Translated: 28540; Mature: 28409
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADWSAAQYLKFEDERTRPARDLVAQVPVDFPRRVVDIGCGPGNSTELLVQRWPDAQVSG CCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHEEECCCCCCCC FDTSPDMIEKARVRLPNVSFDLADASTWQPAEPVNVIFANAVFQWLPTHPAVFQRLMGFL CCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH APGGALAVQMPDNLLEPSHQMMRDTAAEMPFADKLKGAARGPLPPVSFYYDLMSPLADRL CCCCEEEEECCHHHHCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH DIWHTAYNHPLADAEAIVEWVKSTGLKPFLDPLDADERKMFLDSYTAKIAKAYPKTADGK HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE VLLRFPRIFIVAKRAG EEEEECEEEEEEECCC >Mature Secondary Structure ADWSAAQYLKFEDERTRPARDLVAQVPVDFPRRVVDIGCGPGNSTELLVQRWPDAQVSG CCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHEEECCCCCCCC FDTSPDMIEKARVRLPNVSFDLADASTWQPAEPVNVIFANAVFQWLPTHPAVFQRLMGFL CCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH APGGALAVQMPDNLLEPSHQMMRDTAAEMPFADKLKGAARGPLPPVSFYYDLMSPLADRL CCCCEEEEECCHHHHCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH DIWHTAYNHPLADAEAIVEWVKSTGLKPFLDPLDADERKMFLDSYTAKIAKAYPKTADGK HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE VLLRFPRIFIVAKRAG EEEEECEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968