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The map label for this gene is yfiO [C]

Identifier: 13471541

GI number: 13471541

Start: 1283556

End: 1284425

Strand: Reverse

Name: yfiO [C]

Synonym: mll1543

Alternate gene names: 13471541

Gene position: 1284425-1283556 (Counterclockwise)

Preceding gene: 13471542

Following gene: 13471539

Centisome position: 18.25

GC content: 59.89

Gene sequence:

>870_bases
ATGTTCTTCAAGCGAGTCGGTCAATCGAAAGCGCCCCAGCGGTCTGTTCTCCTGGCGCTTTCGCTGGTTGTTCCATCGCT
CTTTCTGTCGGCCTGCATGTCGTCGGAGAAAGACATCGACCTGTCGAAATATGTCGACCAGACCGAGCCGGCCGACGTTC
TCTACAACCAGGGTCTCGCCAATTTGAATGCCGGACGCCTGGACGAGGCGAGCAAGAAGTTCGACGCCGTCGACCGCCAG
CACCCCTATTCGGAATGGGCCCGCAAGTCGATGGTGATGGGCGCTTTCGCCGACTATCGAAAGGGCAGCTACGACGAAGC
GATCTCGTCGGCTAAGCGCTATCTGGCGCTTTATCCGTCCACCGATGACGCGCCCTATGCGCAGTACATTATCGGCCTGA
GCTATTATCGCCAGATCAAGGACGTGACGCAGGACCAGAAGGAAGCGCGCCAGACGCTGCAGACGATGCAGGATCTGGTC
ACGCGCTGGCCGACGTCGGAATATGTCGACGACGCCAAGGAGAAGATCCGCTTCGCCAACGACCAGCTCGCCGGCAAGGA
AATGCAGATCGGTCGCTATTATCTGGAGCGCCGCGAATATATCGCCGCCGTCAAACGCTTCCGCACCGTGGTGGAGAACT
ATTCCAACACGCGTCACGTCGAGGAAGCGTTGGCTCGCCTCACCGAAAGCTATTACGCGATGGGGCTGACCTCGGAGGCC
CAGACGGCCGCCGCGGTGCTCGGCACCAACTATCCCGACAGCCCGTGGTACAAGGATTCCTACAAGCTCCTGCAGAGCAA
TGGGCTTTCGCCGCGCGAGAATGCCGGATCGTGGATTTCCAAGGCCGGCAAGCTGATCACCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGTCGATTAGTGCATGTCGCTCAAAAGTGGGGACCAGTTTTGAGACAACAGCATGCAAGAGGCACTGAAATAACGC
CGAAAGGGCGCAATCCAATC

Downstream 100 bases:

>100_bases
TCTGTCAGGCGCAAGCGTGCGTAGCGCGCTTTTCGGATTGATCCGATGCTGAAACAAAAAGATAGTGCGGCGCTGCGACT
CCGATCGGTCGCGTGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MFFKRVGQSKAPQRSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQ
HPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQTMQDLV
TRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEA
QTAAAVLGTNYPDSPWYKDSYKLLQSNGLSPRENAGSWISKAGKLITGA

Sequences:

>Translated_289_residues
MFFKRVGQSKAPQRSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQ
HPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQTMQDLV
TRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEA
QTAAAVLGTNYPDSPWYKDSYKLLQSNGLSPRENAGSWISKAGKLITGA
>Mature_289_residues
MFFKRVGQSKAPQRSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLANLNAGRLDEASKKFDAVDRQ
HPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPSTDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQTMQDLV
TRWPTSEYVDDAKEKIRFANDQLAGKEMQIGRYYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEA
QTAAAVLGTNYPDSPWYKDSYKLLQSNGLSPRENAGSWISKAGKLITGA

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats

Homologues:

Organism=Escherichia coli, GI1788947, Length=235, Percent_Identity=23.4042553191489, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1543_RHILO (Q98KC1)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_103107.1
- ProteinModelPortal:   Q98KC1
- GeneID:   1225770
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll1543
- NMPDR:   fig|266835.1.peg.1212
- HOGENOM:   HBG739476
- OMA:   KQRMIYL
- ProtClustDB:   CLSK2502341
- GO:   GO:0005488
- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10
- TIGRFAMs:   TIGR03302

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32761; Mature: 32761

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS50005 TPR; PS50293 TPR_REGION; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKRVGQSKAPQRSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLA
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCC
NLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPS
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCC
TDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DQLAGKEMQIGRYYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH
QTAAAVLGTNYPDSPWYKDSYKLLQSNGLSPRENAGSWISKAGKLITGA
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MFFKRVGQSKAPQRSVLLALSLVVPSLFLSACMSSEKDIDLSKYVDQTEPADVLYNQGLA
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHCCCC
NLNAGRLDEASKKFDAVDRQHPYSEWARKSMVMGAFADYRKGSYDEAISSAKRYLALYPS
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCC
TDDAPYAQYIIGLSYYRQIKDVTQDQKEARQTLQTMQDLVTRWPTSEYVDDAKEKIRFAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DQLAGKEMQIGRYYLERREYIAAVKRFRTVVENYSNTRHVEEALARLTESYYAMGLTSEA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH
QTAAAVLGTNYPDSPWYKDSYKLLQSNGLSPRENAGSWISKAGKLITGA
HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968