| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471513
Identifier: 13471513
GI number: 13471513
Start: 1251942
End: 1252850
Strand: Reverse
Name: 13471513
Synonym: mll1509
Alternate gene names: NA
Gene position: 1252850-1251942 (Counterclockwise)
Preceding gene: 13471514
Following gene: 13471512
Centisome position: 17.81
GC content: 63.81
Gene sequence:
>909_bases ATGATGCCAAACCCGCTTCTCGACATCCGGATCGGCACCATGGTGCGGGCCAATCTCGAAGACCCCGCTGCCTATGTCAG GCAGATCCTGCCGCTTGGTTTCGAGAGCATCCAGCCCTTCTTCTGGCAGACGCTGGGCGGCAAGGACCTTCCGCGCCTTG CCGGCGAGATCCGCGAGGCGATCGGCGATGCCGATGTCGTCGTGTCTTCCCTCGGTGTGTTCGGCAATCCGCTGGAGAGC GGCGAGGTCGATCGCGGCGTGCTCGCGGCCTGGGAAACGGTCATCGATAACGCGCATCTGTTCGGCGCTTCCATGGTCAG TGGCTTCACCGGGCGCTTGCGCGGCAAGAAACTGACCGACAGCCTGCCGCGCTTTCGCGAGGTGTGGGGACCGCTGGCCA AGCGCGCCGCCGACAAGGGCGTGCGCATCGCCTTCGAGAATTGCGCCATGGACGGCAATTGGGCGGTCGGCGACTGGAAC ATCGCCCACAATCCGGACGCCTGGGAGCTGATGTTCAACGAATTGCCTGACGATAATCTGGGTCTCGAATGGGAGCCCTG CCATCAGCTCGTCTATCTGATCGACCCGATCCCGCAGATCCGCAAATGGGCGCCGCGCATCTTCCATGTCCATGGCAAGG ACGCCACCGTGCGCTGGGACGTCATCCGCGAGCACGGCGTGTTTGGCCGCCTGCCTTTCGTACAGATGCGCACGCCCGGC TTCGGCGACAGCGACTGGACGCGGGTGATCAGCGAATTGCGGCTGGCCGGCTACAAGGGCGCCATCGACATCGAGGGCTG GCATGACCCGGTCTATCGCGACGATCTCGAAATCACGGGGCAGGCGCGGGCGTTGGAATATCTCAAACAATGCCGGGGAG GCGCCAGCTACCTGCAAAATCCGACGTGA
Upstream 100 bases:
>100_bases AGACGCATGGCGCCGATAACATCAAAAGCCTGGCCATGGTTTTTGGCGCCATCGAGAGCGCCGAGACCGGCCGGCGCGTG GCGATTGCAAGGGAAGGACC
Downstream 100 bases:
>100_bases GGACAAATTTGATGAGAGAATTGGCCGGCGGAGGAGCCGGTTCGTAAGTGGCGAAGCAATCGTCAACAGCCCCCTCGGCT GACGAGGGAAACAAAGGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain Protein; Xylose Isomerase-Like; AP-Endonuclease/AP-Lyase; Isomerase/Epimerase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MMPNPLLDIRIGTMVRANLEDPAAYVRQILPLGFESIQPFFWQTLGGKDLPRLAGEIREAIGDADVVVSSLGVFGNPLES GEVDRGVLAAWETVIDNAHLFGASMVSGFTGRLRGKKLTDSLPRFREVWGPLAKRAADKGVRIAFENCAMDGNWAVGDWN IAHNPDAWELMFNELPDDNLGLEWEPCHQLVYLIDPIPQIRKWAPRIFHVHGKDATVRWDVIREHGVFGRLPFVQMRTPG FGDSDWTRVISELRLAGYKGAIDIEGWHDPVYRDDLEITGQARALEYLKQCRGGASYLQNPT
Sequences:
>Translated_302_residues MMPNPLLDIRIGTMVRANLEDPAAYVRQILPLGFESIQPFFWQTLGGKDLPRLAGEIREAIGDADVVVSSLGVFGNPLES GEVDRGVLAAWETVIDNAHLFGASMVSGFTGRLRGKKLTDSLPRFREVWGPLAKRAADKGVRIAFENCAMDGNWAVGDWN IAHNPDAWELMFNELPDDNLGLEWEPCHQLVYLIDPIPQIRKWAPRIFHVHGKDATVRWDVIREHGVFGRLPFVQMRTPG FGDSDWTRVISELRLAGYKGAIDIEGWHDPVYRDDLEITGQARALEYLKQCRGGASYLQNPT >Mature_302_residues MMPNPLLDIRIGTMVRANLEDPAAYVRQILPLGFESIQPFFWQTLGGKDLPRLAGEIREAIGDADVVVSSLGVFGNPLES GEVDRGVLAAWETVIDNAHLFGASMVSGFTGRLRGKKLTDSLPRFREVWGPLAKRAADKGVRIAFENCAMDGNWAVGDWN IAHNPDAWELMFNELPDDNLGLEWEPCHQLVYLIDPIPQIRKWAPRIFHVHGKDATVRWDVIREHGVFGRLPFVQMRTPG FGDSDWTRVISELRLAGYKGAIDIEGWHDPVYRDDLEITGQARALEYLKQCRGGASYLQNPT
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33888; Mature: 33888
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPNPLLDIRIGTMVRANLEDPAAYVRQILPLGFESIQPFFWQTLGGKDLPRLAGEIREA CCCCCCEEEEECCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH IGDADVVVSSLGVFGNPLESGEVDRGVLAAWETVIDNAHLFGASMVSGFTGRLRGKKLTD HCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH SLPRFREVWGPLAKRAADKGVRIAFENCAMDGNWAVGDWNIAHNPDAWELMFNELPDDNL HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCC GLEWEPCHQLVYLIDPIPQIRKWAPRIFHVHGKDATVRWDVIREHGVFGRLPFVQMRTPG CCCCHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCEEEEHHHHHCCCCCCCCEEEEECCC FGDSDWTRVISELRLAGYKGAIDIEGWHDPVYRDDLEITGQARALEYLKQCRGGASYLQN CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCC PT CC >Mature Secondary Structure MMPNPLLDIRIGTMVRANLEDPAAYVRQILPLGFESIQPFFWQTLGGKDLPRLAGEIREA CCCCCCEEEEECCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHH IGDADVVVSSLGVFGNPLESGEVDRGVLAAWETVIDNAHLFGASMVSGFTGRLRGKKLTD HCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH SLPRFREVWGPLAKRAADKGVRIAFENCAMDGNWAVGDWNIAHNPDAWELMFNELPDDNL HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCC GLEWEPCHQLVYLIDPIPQIRKWAPRIFHVHGKDATVRWDVIREHGVFGRLPFVQMRTPG CCCCHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCEEEEHHHHHCCCCCCCCEEEEECCC FGDSDWTRVISELRLAGYKGAIDIEGWHDPVYRDDLEITGQARALEYLKQCRGGASYLQN CCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCC PT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA