| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471361
Identifier: 13471361
GI number: 13471361
Start: 1099854
End: 1100669
Strand: Reverse
Name: 13471361
Synonym: mll1309
Alternate gene names: NA
Gene position: 1100669-1099854 (Counterclockwise)
Preceding gene: 13471362
Following gene: 13471360
Centisome position: 15.64
GC content: 67.89
Gene sequence:
>816_bases ATGAATCTGTTTCGCAACGTCGTGTTCATCGCGGCGATCGCAGGGCTCGTGGCCGGCGTTGTCCTTGCCTGCATGCAGGC CTATGCCACCGTACCACTGATCCTCAAGGCGGAAGTCTACGAACAGGCCGAAGGCGGCCATAGCCATGACCATGCCGCCG CACCCGCGACGCCAACCGGGGCCGCCAGCGGCACCGCGATGAGTTCGGCCCCACCGGCGGCAAATTCGATGAGCGCCGCC ACCCCGGCTCCGGCCGTAGCCGCCGCTCCGGCCGAAGACGAGGGCTGGGCACCGGCCGACGGCTTCGAGCGCTTTGCCTT CAACGTCGTGTCCAATGTCGTCACCGGCATCGGCTTCGCGCTGATCCTGGTCGCGGTTTCGGAATTCGCCGGCGGTATCG GCAATTGGCGCCAGGGCGTCTTCTGGGGCCTGGCCGGCTTTGCCGTCTTCACATTGGCGCCCGGTCTCGGCCTGCCGCCG GAACTGCCCGCCATGCCTGCCGCCGACCTGACGCAGCGCCAGATCTGGTGGGTGGCGACCGTGATCGCGACCGCCATCGG GCTCGGCCTGATCGCGTTCCGCAAGTCGCTGCCGCTGGCCATTCTTGCCGTGGCGCTGATCGTTGCTCCGCACATTGTGG GTGCGCCGCAGCCCGACAGCTTCGAGACGCCGATCCCGGAAGGTCTGCACCACCAGTTCGTGGTGGCGGTGACGCTGACC AATCTGGTGTTCTGGCTGGTGCTCGGCGCCGTCGTCGGCGTGGTGCGCGGACGCTTTACCGGCACGGCGACCAGCCTGCG CGACAGCTTTGCCTGA
Upstream 100 bases:
>100_bases CGGCTTTGTCGGCTTCTCGCATATCGATGCTGTGCACAATGCCGGTCATGACAACCGGCATTCGATGGCGTTTCCCTGCC ACTGACGAGGATCTGACATC
Downstream 100 bases:
>100_bases TCGCAACAAGCTGACCTTCATCATCGGCGGTGCGCGCTCCGGCAAGAGCGCGCATGCCGAAATCCTGGTGACGGCGTTGC CGTCGCCATGGACCTATATC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNLFRNVVFIAAIAGLVAGVVLACMQAYATVPLILKAEVYEQAEGGHSHDHAAAPATPTGAASGTAMSSAPPAANSMSAA TPAPAVAAAPAEDEGWAPADGFERFAFNVVSNVVTGIGFALILVAVSEFAGGIGNWRQGVFWGLAGFAVFTLAPGLGLPP ELPAMPAADLTQRQIWWVATVIATAIGLGLIAFRKSLPLAILAVALIVAPHIVGAPQPDSFETPIPEGLHHQFVVAVTLT NLVFWLVLGAVVGVVRGRFTGTATSLRDSFA
Sequences:
>Translated_271_residues MNLFRNVVFIAAIAGLVAGVVLACMQAYATVPLILKAEVYEQAEGGHSHDHAAAPATPTGAASGTAMSSAPPAANSMSAA TPAPAVAAAPAEDEGWAPADGFERFAFNVVSNVVTGIGFALILVAVSEFAGGIGNWRQGVFWGLAGFAVFTLAPGLGLPP ELPAMPAADLTQRQIWWVATVIATAIGLGLIAFRKSLPLAILAVALIVAPHIVGAPQPDSFETPIPEGLHHQFVVAVTLT NLVFWLVLGAVVGVVRGRFTGTATSLRDSFA >Mature_271_residues MNLFRNVVFIAAIAGLVAGVVLACMQAYATVPLILKAEVYEQAEGGHSHDHAAAPATPTGAASGTAMSSAPPAANSMSAA TPAPAVAAAPAEDEGWAPADGFERFAFNVVSNVVTGIGFALILVAVSEFAGGIGNWRQGVFWGLAGFAVFTLAPGLGLPP ELPAMPAADLTQRQIWWVATVIATAIGLGLIAFRKSLPLAILAVALIVAPHIVGAPQPDSFETPIPEGLHHQFVVAVTLT NLVFWLVLGAVVGVVRGRFTGTATSLRDSFA
Specific function: Unknown
COG id: COG5446
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27753; Mature: 27753
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFRNVVFIAAIAGLVAGVVLACMQAYATVPLILKAEVYEQAEGGHSHDHAAAPATPTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AASGTAMSSAPPAANSMSAATPAPAVAAAPAEDEGWAPADGFERFAFNVVSNVVTGIGFA CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LILVAVSEFAGGIGNWRQGVFWGLAGFAVFTLAPGLGLPPELPAMPAADLTQRQIWWVAT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH VIATAIGLGLIAFRKSLPLAILAVALIVAPHIVGAPQPDSFETPIPEGLHHQFVVAVTLT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH NLVFWLVLGAVVGVVRGRFTGTATSLRDSFA HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC >Mature Secondary Structure MNLFRNVVFIAAIAGLVAGVVLACMQAYATVPLILKAEVYEQAEGGHSHDHAAAPATPTG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AASGTAMSSAPPAANSMSAATPAPAVAAAPAEDEGWAPADGFERFAFNVVSNVVTGIGFA CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LILVAVSEFAGGIGNWRQGVFWGLAGFAVFTLAPGLGLPPELPAMPAADLTQRQIWWVAT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH VIATAIGLGLIAFRKSLPLAILAVALIVAPHIVGAPQPDSFETPIPEGLHHQFVVAVTLT HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH NLVFWLVLGAVVGVVRGRFTGTATSLRDSFA HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA