Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471335

Identifier: 13471335

GI number: 13471335

Start: 1077650

End: 1078354

Strand: Reverse

Name: 13471335

Synonym: mll1278

Alternate gene names: NA

Gene position: 1078354-1077650 (Counterclockwise)

Preceding gene: 13471341

Following gene: 13471329

Centisome position: 15.33

GC content: 63.4

Gene sequence:

>705_bases
ATGTTGGAAAAGAAGGCTCGAATCGCGGATGAGGCCGAGATCGTCGACGAGGCGATCGTGTCGCGCCGCTCGGTGCGCGC
ATTTTTGCCCGACATGATCGACGACGACACCATCCGCGACATTCTGGAGGTTGCGGCGCGCGCGCCGTCCGGCACCAACA
TGCAGCCATGGCGGGTCTACGTCACCAAGGGCGAGACCAAGCAGCAGATCTCGGATGCCATTCTGAATTCCGGTATCCGC
GCCGAAAAGGCCGACTGGGACGAGTATCGCTACTATCCCACCCAGTTCTTCGAACCTTATCTGACGCGACGACGCGCCAA
TGGCTTCGGCCTCTATGGCGCGCTCGGCATTGGCCGCCGCGAGGTCGACAAGATGCGTGCCCAGCACGACCGCAACTTCG
TCTTCTTCGACGCGCCGGTCGGCATGATCTTCACCATCGACCGCCGGCTCAACCAGGGCTCGTGGATCGACTACGGCATG
TTCCTGCAGAACATCATGGTCGCGGCGCGGGGCAGGGGCCTGCACACATGCCCGCAGGCGGCCTTCGCGCCCTACCACCG
GCAGATCCGGCCGGTGCTCAACATTCCCGACGAGGAGATCGTCGTCTGCGGCATGGCGCTCGGCTATGAGGACACCTCCA
AGCCGGAAAACGCCTTCCGCACCGACCGCGTGCCGCTGGAAGAGTGGGTGACGTTCAGCGAATAG

Upstream 100 bases:

>100_bases
GCTCAAGATTTGCTTGCAGGATTTTGACGGTTCATGCAAAGGCTCCGCCGCGAGCGGCGAGTGGGGACGTCCGATCGACG
CAAAGGCTAAGGGACGGCCC

Downstream 100 bases:

>100_bases
AGCGGCTGCCCGGCAAAGGCTATTCCGTATTCATCTGTGCACCGTGGCCGCTGACATGGGCGCCGTCCTGCGGTGTCAGC
TTGAGGTAGGCAAGCAGCGC

Product: nitroreductase

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; P-Nitrobenzoate Reductase; NfnB Protein; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Reductase

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLEKKARIADEAEIVDEAIVSRRSVRAFLPDMIDDDTIRDILEVAARAPSGTNMQPWRVYVTKGETKQQISDAILNSGIR
AEKADWDEYRYYPTQFFEPYLTRRRANGFGLYGALGIGRREVDKMRAQHDRNFVFFDAPVGMIFTIDRRLNQGSWIDYGM
FLQNIMVAARGRGLHTCPQAAFAPYHRQIRPVLNIPDEEIVVCGMALGYEDTSKPENAFRTDRVPLEEWVTFSE

Sequences:

>Translated_234_residues
MLEKKARIADEAEIVDEAIVSRRSVRAFLPDMIDDDTIRDILEVAARAPSGTNMQPWRVYVTKGETKQQISDAILNSGIR
AEKADWDEYRYYPTQFFEPYLTRRRANGFGLYGALGIGRREVDKMRAQHDRNFVFFDAPVGMIFTIDRRLNQGSWIDYGM
FLQNIMVAARGRGLHTCPQAAFAPYHRQIRPVLNIPDEEIVVCGMALGYEDTSKPENAFRTDRVPLEEWVTFSE
>Mature_234_residues
MLEKKARIADEAEIVDEAIVSRRSVRAFLPDMIDDDTIRDILEVAARAPSGTNMQPWRVYVTKGETKQQISDAILNSGIR
AEKADWDEYRYYPTQFFEPYLTRRRANGFGLYGALGIGRREVDKMRAQHDRNFVFFDAPVGMIFTIDRRLNQGSWIDYGM
FLQNIMVAARGRGLHTCPQAAFAPYHRQIRPVLNIPDEEIVVCGMALGYEDTSKPENAFRTDRVPLEEWVTFSE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26919; Mature: 26919

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKKARIADEAEIVDEAIVSRRSVRAFLPDMIDDDTIRDILEVAARAPSGTNMQPWRVY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEE
VTKGETKQQISDAILNSGIRAEKADWDEYRYYPTQFFEPYLTRRRANGFGLYGALGIGRR
EECCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHH
EVDKMRAQHDRNFVFFDAPVGMIFTIDRRLNQGSWIDYGMFLQNIMVAARGRGLHTCPQA
HHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
AFAPYHRQIRPVLNIPDEEIVVCGMALGYEDTSKPENAFRTDRVPLEEWVTFSE
HHHHHHHHHHHHCCCCCCCEEEEEEHCCCCCCCCCCHHHHCCCCCHHHCCCCCC
>Mature Secondary Structure
MLEKKARIADEAEIVDEAIVSRRSVRAFLPDMIDDDTIRDILEVAARAPSGTNMQPWRVY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEE
VTKGETKQQISDAILNSGIRAEKADWDEYRYYPTQFFEPYLTRRRANGFGLYGALGIGRR
EECCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHH
EVDKMRAQHDRNFVFFDAPVGMIFTIDRRLNQGSWIDYGMFLQNIMVAARGRGLHTCPQA
HHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
AFAPYHRQIRPVLNIPDEEIVVCGMALGYEDTSKPENAFRTDRVPLEEWVTFSE
HHHHHHHHHHHHCCCCCCCEEEEEEHCCCCCCCCCCHHHHCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA