| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471264
Identifier: 13471264
GI number: 13471264
Start: 996017
End: 996448
Strand: Reverse
Name: 13471264
Synonym: mll1184
Alternate gene names: NA
Gene position: 996448-996017 (Counterclockwise)
Preceding gene: 13471270
Following gene: 13471263
Centisome position: 14.16
GC content: 60.65
Gene sequence:
>432_bases ATGAGGAAGTTCTTTCTCGTAGCAGCGGCGATGTTGGCAACCGCGCTGTTTGGTACGCCGTCCGCAAGTTACGCGGCGAT GTTGGAAGCAAATATCGACGTGTCGTCACAGACGATGACGGTACGTTACGGGTCGGAGGTTTATCGCTGGGTCGTGTCGA CTGCCCGTCCGGGCTATTTCACGCCGCGTGGCACGTATCGGCCGCAGCGGACCGCTCGGATGTGGTATTCGCGCAAATAC GACATGTCGCCGATGCCTTATTCCGTGTTCTTCCATGGCGGCTATGCCATCCATGGGACGGGCGCGGTCAGGCAACTCGG CCGTCCGGCCTCGCATGGCTGCGTGCGGCTGCACACGGCCAATGCCGCGACCTTCTATGCCATGGTGCGGGAAGTGGGCT TCGGCAACACGCGCATTGTCGTGACGAATTAG
Upstream 100 bases:
>100_bases AATTGATCAAGGAGTGTGTGCTATTTGTTCACTGCCATTAAAAAGATGAAAAACAACGTGATGGCAAGCAGACAAGGGGC AATCAAAGGGGTTTGATCGC
Downstream 100 bases:
>100_bases CAGCACGCGCGAATCTCGTTGCCGGGCCGGAGCCCGGCGCGAGACTTACTACTGGCGGCAACAACAATCGGCCAAGGTTT TACCTGTTCCGAGATGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRKFFLVAAAMLATALFGTPSASYAAMLEANIDVSSQTMTVRYGSEVYRWVVSTARPGYFTPRGTYRPQRTARMWYSRKY DMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTANAATFYAMVREVGFGNTRIVVTN
Sequences:
>Translated_143_residues MRKFFLVAAAMLATALFGTPSASYAAMLEANIDVSSQTMTVRYGSEVYRWVVSTARPGYFTPRGTYRPQRTARMWYSRKY DMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTANAATFYAMVREVGFGNTRIVVTN >Mature_143_residues MRKFFLVAAAMLATALFGTPSASYAAMLEANIDVSSQTMTVRYGSEVYRWVVSTARPGYFTPRGTYRPQRTARMWYSRKY DMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTANAATFYAMVREVGFGNTRIVVTN
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15939; Mature: 15939
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFFLVAAAMLATALFGTPSASYAAMLEANIDVSSQTMTVRYGSEVYRWVVSTARPGYF CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECHHHHHHHHHCCCCCCC TPRGTYRPQRTARMWYSRKYDMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTA CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCHHHHHCCCCCCCCEEEEEEC NAATFYAMVREVGFGNTRIVVTN CHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MRKFFLVAAAMLATALFGTPSASYAAMLEANIDVSSQTMTVRYGSEVYRWVVSTARPGYF CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECHHHHHHHHHCCCCCCC TPRGTYRPQRTARMWYSRKYDMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTA CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCEEEECCHHHHHCCCCCCCCEEEEEEC NAATFYAMVREVGFGNTRIVVTN CHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA