| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471182
Identifier: 13471182
GI number: 13471182
Start: 906766
End: 907599
Strand: Direct
Name: 13471182
Synonym: mlr1084
Alternate gene names: NA
Gene position: 906766-907599 (Clockwise)
Preceding gene: 13471176
Following gene: 13471190
Centisome position: 12.89
GC content: 64.51
Gene sequence:
>834_bases ATGCTCGATCAGCGGCGCCGACGATTTTTCGATCTCGTCCTTTTCCTTGTCCGAAACGCTCACTTGGCGGCTCCCGCCGT CTTCTTGGCCGATGGCTTCTTCGCCGGAGCAGGTTTCGGTTCGGCTTTCGCCACGGTCTTTGCCGCAGCCGCCTTTGCGG GCTTTGCTGCTGTCACGGCCTTTGTCGACGCCTTAGGCGCGGATGCTGCTTTTGCGGCCGCAGCAGGTGCGACTTTTGCC GTCACCGACTTCGCGGATGTCGAGGCCTTGGGCTGCGCCTTTGCCGCTGGCGCCGCCTTGGCGGCTTTCTTGGCTGCGGA TGCCTTCGGCGCCGCGGCAGGTTCCGTGGATGCCGCCACCACCGATTCATCGGTCATGGCCGGGAAAATCGGCGTCGGCG GCGTGGCTCCCGCGGCGCTGACGCCAGGCATTTCCGTCGCACCGTTCTTCAGCGGCTCGGCCGCCTGCGGCGTCGAAGCG GCAGGCGCTGCCGGATCGGCGGCCGGCTTCGGCTTCATCGCCGCGTCGACGCCGGCGCGCACATCGGCCGCTGCCTGTTC GAACGGATTGAGCTGCTTGCGGATCTCTGCAACGGGGCTGAGGCCCCTGAGTTCGTCGACCGACTTCTTGACGTCGTCGA GCTCGGCTTCCTTCAGTGCTTCGTTGAACTGTTTCTGGAAGTCGGCGGCCATAGAGCGCAGCTTCGCCGTCGTGCGACCG AAGGTGCGCAGCATATTGGGCAAATCCTTCGGCCCGACGACCACGATCATGACGATCGCGATCACCAGCATTTCGGTCCA GCCGACTTCAAACATGGCACTCTGTTCCGACTAG
Upstream 100 bases:
>100_bases CCAGGAGGTTGAACAGCTTCTTGGCGAAGAAGAAGCACACCAGGAAGGCGACGAAGAAGCCGCCGAGCGACCAGATTAGC CGGCGACGTAGCTCGATGAG
Downstream 100 bases:
>100_bases AACTTTTTTGGCTCAGCTCTTGCTGGCTTTTTCCTTCACGGCCGAAACGGTCTCGTCGGCACGGTGTTCGACGGTGCGTT TGTCGTCGGCGACGTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLDQRRRRFFDLVLFLVRNAHLAAPAVFLADGFFAGAGFGSAFATVFAAAAFAGFAAVTAFVDALGADAAFAAAAGATFA VTDFADVEALGCAFAAGAALAAFLAADAFGAAAGSVDAATTDSSVMAGKIGVGGVAPAALTPGISVAPFFSGSAACGVEA AGAAGSAAGFGFIAASTPARTSAAACSNGLSCLRISATGLRPLSSSTDFLTSSSSASFSASLNCFWKSAAIERSFAVVRP KVRSILGKSFGPTTTIMTIAITSISVQPTSNMALCSD
Sequences:
>Translated_277_residues MLDQRRRRFFDLVLFLVRNAHLAAPAVFLADGFFAGAGFGSAFATVFAAAAFAGFAAVTAFVDALGADAAFAAAAGATFA VTDFADVEALGCAFAAGAALAAFLAADAFGAAAGSVDAATTDSSVMAGKIGVGGVAPAALTPGISVAPFFSGSAACGVEA AGAAGSAAGFGFIAASTPARTSAAACSNGLSCLRISATGLRPLSSSTDFLTSSSSASFSASLNCFWKSAAIERSFAVVRP KVRSILGKSFGPTTTIMTIAITSISVQPTSNMALCSD >Mature_277_residues MLDQRRRRFFDLVLFLVRNAHLAAPAVFLADGFFAGAGFGSAFATVFAAAAFAGFAAVTAFVDALGADAAFAAAAGATFA VTDFADVEALGCAFAAGAALAAFLAADAFGAAAGSVDAATTDSSVMAGKIGVGGVAPAALTPGISVAPFFSGSAACGVEA AGAAGSAAGFGFIAASTPARTSAAACSNGLSCLRISATGLRPLSSSTDFLTSSSSASFSASLNCFWKSAAIERSFAVVRP KVRSILGKSFGPTTTIMTIAITSISVQPTSNMALCSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27160; Mature: 27160
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDQRRRRFFDLVLFLVRNAHLAAPAVFLADGFFAGAGFGSAFATVFAAAAFAGFAAVTA CCCHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FVDALGADAAFAAAAGATFAVTDFADVEALGCAFAAGAALAAFLAADAFGAAAGSVDAAT HHHHHCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TDSSVMAGKIGVGGVAPAALTPGISVAPFFSGSAACGVEAAGAAGSAAGFGFIAASTPAR CCCCCEECCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC TSAAACSNGLSCLRISATGLRPLSSSTDFLTSSSSASFSASLNCFWKSAAIERSFAVVRP HHHHHHHCCCEEEEEECCCCCCCCCCCCCEECCCCCCEEEEHHHEEHHHHHHHHHHHHHH KVRSILGKSFGPTTTIMTIAITSISVQPTSNMALCSD HHHHHHCCCCCCHHEEEEEEEEEEEECCCCCEECCCC >Mature Secondary Structure MLDQRRRRFFDLVLFLVRNAHLAAPAVFLADGFFAGAGFGSAFATVFAAAAFAGFAAVTA CCCHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FVDALGADAAFAAAAGATFAVTDFADVEALGCAFAAGAALAAFLAADAFGAAAGSVDAAT HHHHHCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TDSSVMAGKIGVGGVAPAALTPGISVAPFFSGSAACGVEAAGAAGSAAGFGFIAASTPAR CCCCCEECCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC TSAAACSNGLSCLRISATGLRPLSSSTDFLTSSSSASFSASLNCFWKSAAIERSFAVVRP HHHHHHHCCCEEEEEECCCCCCCCCCCCCEECCCCCCEEEEHHHEEHHHHHHHHHHHHHH KVRSILGKSFGPTTTIMTIAITSISVQPTSNMALCSD HHHHHHCCCCCCHHEEEEEEEEEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA