| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470895
Identifier: 13470895
GI number: 13470895
Start: 564834
End: 565565
Strand: Reverse
Name: 13470895
Synonym: mll0713
Alternate gene names: NA
Gene position: 565565-564834 (Counterclockwise)
Preceding gene: 13470896
Following gene: 13470894
Centisome position: 8.04
GC content: 60.52
Gene sequence:
>732_bases ATGACCTATTGCGTCGGCCTGAAGATCGATCGCGGGCTCGTGTTCATGTCGGACACGCGCACCAATGCCGGCATGGATTC GATCTCGACCTTCAAGAAGATGCATGTCTGGGAACAGCCGGGTGAGCGCGTCATCGTCTTGATGTCGGCCGGCAACCTGG CGACGACGCAGGCCGTGGTCAGCCTGCTCGACGAACGCACCAAGGCGGTGACCGACCGCCACGAGAAGCTGCTCGAGACG CCATCCATGTACCAGACGGTGCGGCTGGTGGGCGACACGGTGAAAGAGGTGATCGCGCAATCGTCTCCCGCCGGCGAGAA GGCCGATTCCTATTTCAACGCCTCCTTCATCCTCGGCGGCCAGATCTTGGGCAGTCCGCCGCGGCTGTTCATGATCTATC CCGAGGGCAATTTCATCGAATCGACCGACGACACGCCGTTCTTCCAGATCGGCGAGACCAAATACGGCAAGCCGATCATC ATCCGCGCCTATGAGCGGACGATGAGCCTGGCCGAGACGGTGAAGCTGCTCCTGGTGTCGTTCGATTCGACACTCAAGTC GAACCTGTCGGTCGGCCTGCCACTCGACCTGCTGTTCCTGGAAAAGGACGCCTTCAAGGTTGGCCTGAAGAAGCGGATCG CTCAGGACGACCAGTATTACCGCACCATCTCCGATGGCTGGTCGAATGCGCTGAAGAGCGCCTTTGCCAGCCTGCCGGAT TTTCCGGGGTGA
Upstream 100 bases:
>100_bases CCGGTGTCGGGAATTCGACAGGGACAAGCGGAAGAACGGCTTGCGGTCACCGTCACGGTAGAGCAGTAATCCCGCAAGGA TTAGTGCCAGAAGCGATTCC
Downstream 100 bases:
>100_bases TGCATGTCGCCCAAAAGTGGCCCCGGTTTTGGGGGGAACGACATGCACAAGAACAGGGATCTAAAGCGCATCGCCTGGAT CCGATCAAGCGATGCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVVSLLDERTKAVTDRHEKLLET PSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGGQILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPII IRAYERTMSLAETVKLLLVSFDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD FPG
Sequences:
>Translated_243_residues MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVVSLLDERTKAVTDRHEKLLET PSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGGQILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPII IRAYERTMSLAETVKLLLVSFDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD FPG >Mature_242_residues TYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVVSLLDERTKAVTDRHEKLLETP SMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGGQILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIII RAYERTMSLAETVKLLLVSFDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPDF PG
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26971; Mature: 26840
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVV CEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH SLLDERTKAVTDRHEKLLETPSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECC QILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIIIRAYERTMSLAETVKLLLVS EEECCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH FDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD HHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC FPG CCC >Mature Secondary Structure TYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVV EEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH SLLDERTKAVTDRHEKLLETPSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECC QILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIIIRAYERTMSLAETVKLLLVS EEECCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH FDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD HHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC FPG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA