Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470895

Identifier: 13470895

GI number: 13470895

Start: 564834

End: 565565

Strand: Reverse

Name: 13470895

Synonym: mll0713

Alternate gene names: NA

Gene position: 565565-564834 (Counterclockwise)

Preceding gene: 13470896

Following gene: 13470894

Centisome position: 8.04

GC content: 60.52

Gene sequence:

>732_bases
ATGACCTATTGCGTCGGCCTGAAGATCGATCGCGGGCTCGTGTTCATGTCGGACACGCGCACCAATGCCGGCATGGATTC
GATCTCGACCTTCAAGAAGATGCATGTCTGGGAACAGCCGGGTGAGCGCGTCATCGTCTTGATGTCGGCCGGCAACCTGG
CGACGACGCAGGCCGTGGTCAGCCTGCTCGACGAACGCACCAAGGCGGTGACCGACCGCCACGAGAAGCTGCTCGAGACG
CCATCCATGTACCAGACGGTGCGGCTGGTGGGCGACACGGTGAAAGAGGTGATCGCGCAATCGTCTCCCGCCGGCGAGAA
GGCCGATTCCTATTTCAACGCCTCCTTCATCCTCGGCGGCCAGATCTTGGGCAGTCCGCCGCGGCTGTTCATGATCTATC
CCGAGGGCAATTTCATCGAATCGACCGACGACACGCCGTTCTTCCAGATCGGCGAGACCAAATACGGCAAGCCGATCATC
ATCCGCGCCTATGAGCGGACGATGAGCCTGGCCGAGACGGTGAAGCTGCTCCTGGTGTCGTTCGATTCGACACTCAAGTC
GAACCTGTCGGTCGGCCTGCCACTCGACCTGCTGTTCCTGGAAAAGGACGCCTTCAAGGTTGGCCTGAAGAAGCGGATCG
CTCAGGACGACCAGTATTACCGCACCATCTCCGATGGCTGGTCGAATGCGCTGAAGAGCGCCTTTGCCAGCCTGCCGGAT
TTTCCGGGGTGA

Upstream 100 bases:

>100_bases
CCGGTGTCGGGAATTCGACAGGGACAAGCGGAAGAACGGCTTGCGGTCACCGTCACGGTAGAGCAGTAATCCCGCAAGGA
TTAGTGCCAGAAGCGATTCC

Downstream 100 bases:

>100_bases
TGCATGTCGCCCAAAAGTGGCCCCGGTTTTGGGGGGAACGACATGCACAAGAACAGGGATCTAAAGCGCATCGCCTGGAT
CCGATCAAGCGATGCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVVSLLDERTKAVTDRHEKLLET
PSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGGQILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPII
IRAYERTMSLAETVKLLLVSFDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD
FPG

Sequences:

>Translated_243_residues
MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVVSLLDERTKAVTDRHEKLLET
PSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGGQILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPII
IRAYERTMSLAETVKLLLVSFDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD
FPG
>Mature_242_residues
TYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVVSLLDERTKAVTDRHEKLLETP
SMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGGQILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIII
RAYERTMSLAETVKLLLVSFDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPDF
PG

Specific function: Unknown

COG id: COG3484

COG function: function code O; Predicted proteasome-type protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26971; Mature: 26840

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVV
CEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
SLLDERTKAVTDRHEKLLETPSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECC
QILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIIIRAYERTMSLAETVKLLLVS
EEECCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
FDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD
HHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
FPG
CCC
>Mature Secondary Structure 
TYCVGLKIDRGLVFMSDTRTNAGMDSISTFKKMHVWEQPGERVIVLMSAGNLATTQAVV
EEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
SLLDERTKAVTDRHEKLLETPSMYQTVRLVGDTVKEVIAQSSPAGEKADSYFNASFILGG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECC
QILGSPPRLFMIYPEGNFIESTDDTPFFQIGETKYGKPIIIRAYERTMSLAETVKLLLVS
EEECCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
FDSTLKSNLSVGLPLDLLFLEKDAFKVGLKKRIAQDDQYYRTISDGWSNALKSAFASLPD
HHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
FPG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA