Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470856

Identifier: 13470856

GI number: 13470856

Start: 522590

End: 522919

Strand: Reverse

Name: 13470856

Synonym: mll0665

Alternate gene names: NA

Gene position: 522919-522590 (Counterclockwise)

Preceding gene: 13470858

Following gene: 13470855

Centisome position: 7.43

GC content: 57.88

Gene sequence:

>330_bases
ATGACCCAGACCTATGAGGACTTCAGCAAATACGGCAAGGAATTCGCCGACACCGGTTTGAAGAGCTTCGCTTCGCTCTC
CAAGGGCGCCCAGGCGATCGCCACCGAGGCCGGCGAGTACACCAAGAAGAGCTTTGAGGCCGGCAGCGCCGCTGTCGAGA
AGCTGTTTTCGGCCAAGTCGCTGGACAAGGCGATCGAGATCCAGACCGACTATGCCAAGCAGTCCTATGAAGCGTTCGTC
GCCGAGGCCACCAAGATTGGCGATCTCTATGCCGAACTCGCCAAGGAAGCCTACAAGCCGTTCGAATCGATCGTTGCCAA
GGCGAAGTAA

Upstream 100 bases:

>100_bases
CCGGCGAAATATTGACTTTTGTGCGGCGCACAATATATTGAGGTGCATTGCACAACGGCGCCCCGAAGAAGGACGCCTCA
ACCGTCAAGGGAATCGTGAA

Downstream 100 bases:

>100_bases
TTTCGCCCGATAGTTTCAGATCCGGCCCGTTTGGGCCCGGGACAAAACCCGGTCGCGGAAACGCGGCCGGGTTTTTTCAT
GCTAATTTCCGGTTTGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phasin

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTQTYEDFSKYGKEFADTGLKSFASLSKGAQAIATEAGEYTKKSFEAGSAAVEKLFSAKSLDKAIEIQTDYAKQSYEAFV
AEATKIGDLYAELAKEAYKPFESIVAKAK

Sequences:

>Translated_109_residues
MTQTYEDFSKYGKEFADTGLKSFASLSKGAQAIATEAGEYTKKSFEAGSAAVEKLFSAKSLDKAIEIQTDYAKQSYEAFV
AEATKIGDLYAELAKEAYKPFESIVAKAK
>Mature_108_residues
TQTYEDFSKYGKEFADTGLKSFASLSKGAQAIATEAGEYTKKSFEAGSAAVEKLFSAKSLDKAIEIQTDYAKQSYEAFVA
EATKIGDLYAELAKEAYKPFESIVAKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11863; Mature: 11732

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTYEDFSKYGKEFADTGLKSFASLSKGAQAIATEAGEYTKKSFEAGSAAVEKLFSAKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDKAIEIQTDYAKQSYEAFVAEATKIGDLYAELAKEAYKPFESIVAKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTYEDFSKYGKEFADTGLKSFASLSKGAQAIATEAGEYTKKSFEAGSAAVEKLFSAKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDKAIEIQTDYAKQSYEAFVAEATKIGDLYAELAKEAYKPFESIVAKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA