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The map label for this gene is ynhG [H]

Identifier: 13470809

GI number: 13470809

Start: 474699

End: 475979

Strand: Reverse

Name: ynhG [H]

Synonym: mll0608

Alternate gene names: 13470809

Gene position: 475979-474699 (Counterclockwise)

Preceding gene: 13470810

Following gene: 13470808

Centisome position: 6.76

GC content: 62.06

Gene sequence:

>1281_bases
ATGCTGCGCGATCACGAAGATTCAACGTGCAGCAGCGCGGTCTCGCGCTTGAGACATCCGCGCTTATTCGACTATAGATT
GCGCGCGGCATTTTCGGTGTCCTTGGGGGACGCCGGGCGACGCCGTGGGCAACAAGCATTGAACGATCGGATCTTCGCCA
TGCAGCTTCGCAGCTTCATTTTCTTGGGACTTTGCGCCGTACTCGGCCTGGGTTCCCCGGCTTTCGCCGGCGTGCCGGCC
AATTTGGCCGCCAATCAGTCGGTCGACAAAACCGACGCCATCAACGTCGCAGTCAAGAGCGATGCGGCGCAGTTGAGGCT
TCTCAAGAAGAAGAAAAACCCGACACCGGACGATCTCGCCCAGATCAAGAAAATCGAGGCCAAGATCGTTGCCGACAAGG
AAGACGCCAAGGCCAAGGCGCTCGAAGCCAGGAAGCTGGCGATGCGCGAAGCGGCCAAGGCCAAGGCCGACGCCGAACGG
CAGGCCTTCCTGGCCAAGAGGGAGAAGAGCGCTTCTGCAACGGCCGAAGTGGCTGACGCCAAGCCGGCCAAGAAGACCAC
CAAGGTCATCGAGCCGATCGAACAGATCACACCAATCCAGTCGGCCGAGCCGCTTCCGGCCGAAGCGATGAATGTCGCGC
TGACAGGCAACAATGGCGAGCTTCGCAGTGAGGTCATCGGCCAGAAGCAACCGACCGGCGGCCTTTTCGCCGGCCTGTTC
GGCGGCACCTCCGGGTCGTCGATCAGCTATCTGCCCGAGACGCGGGCTCTCGACCAGGCTCTCGCCAAGAAGGACGCCAA
GAAGCCGTTCAAGGTGAAGCCGGAATTCGTGCCGCAGGATGTGGAATTCACCGGCTATGAGCCGGGCACCATCGTCATCG
ACACCAGCGCCCGCCGGCTCTATCTCGTCGAATCGTTTTCGACCGCGCGTCGCTACGCCATCGCGGTCGGTCGTGAAGGC
CTGCAGTTCAAGGGCACGGTCGCGGTCGGCGACAAGCAGGAATGGCCGCGCTGGATCCCGACCCTCGACATGCAGAAGCG
CGAGCCCAAGCATTACGGCCAGTACAAGGACGGCATGCCCGGCGGTGGCCAGAACCCGCTCGGCGCCCGCGCCATCTATC
TCTATGACGGCAAGAAGGACACGCATCTGCGCATCCACGGCACCATCGCGCCGCAGTCGATCGGAACCAGCGCTTCCAAT
GGCTGCTTCCGCATGATCAACGAGCACGTCATGGATCTCTACAGCCGCGTCAGGGTCGGCACCAAAGTCGTCATCATCTG
A

Upstream 100 bases:

>100_bases
GCACCACCAACACCGCGCCCGCTGCACCGCAGGTCCCGAACCAGTAACGTCCATCTGGTCCAAACCGCGACCTGTGATCG
TTTGAACACAGTCGCGGCAA

Downstream 100 bases:

>100_bases
CGGTTCCATCATCCTGCCGAAAGGGCCGGCTCAGCCGGCCCTTTTGTTTTGCCTCGTTCACGACCAAGCCTGTTCGGTCG
TGATCCCTGGACAAACGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLRDHEDSTCSSAVSRLRHPRLFDYRLRAAFSVSLGDAGRRRGQQALNDRIFAMQLRSFIFLGLCAVLGLGSPAFAGVPA
NLAANQSVDKTDAINVAVKSDAAQLRLLKKKKNPTPDDLAQIKKIEAKIVADKEDAKAKALEARKLAMREAAKAKADAER
QAFLAKREKSASATAEVADAKPAKKTTKVIEPIEQITPIQSAEPLPAEAMNVALTGNNGELRSEVIGQKQPTGGLFAGLF
GGTSGSSISYLPETRALDQALAKKDAKKPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRLYLVESFSTARRYAIAVGREG
LQFKGTVAVGDKQEWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASN
GCFRMINEHVMDLYSRVRVGTKVVII

Sequences:

>Translated_426_residues
MLRDHEDSTCSSAVSRLRHPRLFDYRLRAAFSVSLGDAGRRRGQQALNDRIFAMQLRSFIFLGLCAVLGLGSPAFAGVPA
NLAANQSVDKTDAINVAVKSDAAQLRLLKKKKNPTPDDLAQIKKIEAKIVADKEDAKAKALEARKLAMREAAKAKADAER
QAFLAKREKSASATAEVADAKPAKKTTKVIEPIEQITPIQSAEPLPAEAMNVALTGNNGELRSEVIGQKQPTGGLFAGLF
GGTSGSSISYLPETRALDQALAKKDAKKPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRLYLVESFSTARRYAIAVGREG
LQFKGTVAVGDKQEWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASN
GCFRMINEHVMDLYSRVRVGTKVVII
>Mature_426_residues
MLRDHEDSTCSSAVSRLRHPRLFDYRLRAAFSVSLGDAGRRRGQQALNDRIFAMQLRSFIFLGLCAVLGLGSPAFAGVPA
NLAANQSVDKTDAINVAVKSDAAQLRLLKKKKNPTPDDLAQIKKIEAKIVADKEDAKAKALEARKLAMREAAKAKADAER
QAFLAKREKSASATAEVADAKPAKKTTKVIEPIEQITPIQSAEPLPAEAMNVALTGNNGELRSEVIGQKQPTGGLFAGLF
GGTSGSSISYLPETRALDQALAKKDAKKPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRLYLVESFSTARRYAIAVGREG
LQFKGTVAVGDKQEWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASN
GCFRMINEHVMDLYSRVRVGTKVVII

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=138, Percent_Identity=34.0579710144928, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788299, Length=139, Percent_Identity=34.5323741007194, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787356, Length=142, Percent_Identity=34.5070422535211, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 46404; Mature: 46404

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDHEDSTCSSAVSRLRHPRLFDYRLRAAFSVSLGDAGRRRGQQALNDRIFAMQLRSFI
CCCCCCCHHHHHHHHHHCCCCHHHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
FLGLCAVLGLGSPAFAGVPANLAANQSVDKTDAINVAVKSDAAQLRLLKKKKNPTPDDLA
HHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHH
QIKKIEAKIVADKEDAKAKALEARKLAMREAAKAKADAERQAFLAKREKSASATAEVADA
HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
KPAKKTTKVIEPIEQITPIQSAEPLPAEAMNVALTGNNGELRSEVIGQKQPTGGLFAGLF
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEHCC
GGTSGSSISYLPETRALDQALAKKDAKKPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRL
CCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
YLVESFSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIPTLDMQKREPKHYGQYKDGMP
EEEECHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
GGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASNGCFRMINEHVMDLYSRVRVG
CCCCCCCCCEEEEEECCCCCCEEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
TKVVII
EEEEEC
>Mature Secondary Structure
MLRDHEDSTCSSAVSRLRHPRLFDYRLRAAFSVSLGDAGRRRGQQALNDRIFAMQLRSFI
CCCCCCCHHHHHHHHHHCCCCHHHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
FLGLCAVLGLGSPAFAGVPANLAANQSVDKTDAINVAVKSDAAQLRLLKKKKNPTPDDLA
HHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHH
QIKKIEAKIVADKEDAKAKALEARKLAMREAAKAKADAERQAFLAKREKSASATAEVADA
HHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
KPAKKTTKVIEPIEQITPIQSAEPLPAEAMNVALTGNNGELRSEVIGQKQPTGGLFAGLF
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEHCC
GGTSGSSISYLPETRALDQALAKKDAKKPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRL
CCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE
YLVESFSTARRYAIAVGREGLQFKGTVAVGDKQEWPRWIPTLDMQKREPKHYGQYKDGMP
EEEECHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
GGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTSASNGCFRMINEHVMDLYSRVRVG
CCCCCCCCCEEEEEECCCCCCEEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
TKVVII
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]