| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470784
Identifier: 13470784
GI number: 13470784
Start: 428479
End: 429099
Strand: Reverse
Name: 13470784
Synonym: mll0579
Alternate gene names: NA
Gene position: 429099-428479 (Counterclockwise)
Preceding gene: 13470785
Following gene: 13470783
Centisome position: 6.1
GC content: 57.33
Gene sequence:
>621_bases GTGCATTCGATGACGCAAGGCACGCCTGATGATTCCCGCGAAGCTTTCGCGCGCATTTACCAAAGCAACGAGTGGGGCTC CGCGGAATCGCGCTCCGGGCTCGGTTCAGCGTACGCGACGACGCATCGCGTGCGAACCGTATTGCCGATGCTTTTGCGCG CACTGGATGTGAAGTCCATGCTTGATGCGCCCTGCGGCGACTTCAACTGGATGCGCTTCGTCGACTTGGGCAAAATGCAC TACATCGGTTGCGACATTGTTCCAGAAGTCATCGAAACGAACCGTGTGCGATATGCGGATCGCGAATTTCACGTGCTCGA TCTGGCTGTTGAACCACTGCCGAACGTTGACCTCATTTTTTCACGCGACTGTCTGCAGCATCTGACCGAACCCGACATCT GGCGCGCGCTTCGCAACTTCAAAAAATGCGGCGCGCGCTGGCTGTTCACCTCAAGCCACTCGACCTCGGCACAGGACATT GCGCGGGAAACGGGCGGATTCGGGTTTCTCAACTTACAGCAACCGCCATTCTCGTTGCCGCTGCCACTCCTGATTATGCC GGAGGAACACTACGCATCGAAGGCGATGTGTCTGTGGGACATGGCGCAAATCGGTGCATGA
Upstream 100 bases:
>100_bases ATAGTGCCCTATTCCCTTCCAGTAAGCGTGCTTGACGACTTTTCCGTTTTCAATCAATGCGGCTGGAATCGGGATCGAGC ACGTCACCGGCGTCGATGAG
Downstream 100 bases:
>100_bases CCAGTGCCATTACCGATTCAAATGCTCGTCGTCGCTGCAAAGGCAACTTAGCAAATTACATACCACCCTACGCGTTGTTC AATGGGTGTGGGGTTGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MHSMTQGTPDDSREAFARIYQSNEWGSAESRSGLGSAYATTHRVRTVLPMLLRALDVKSMLDAPCGDFNWMRFVDLGKMH YIGCDIVPEVIETNRVRYADREFHVLDLAVEPLPNVDLIFSRDCLQHLTEPDIWRALRNFKKCGARWLFTSSHSTSAQDI ARETGGFGFLNLQQPPFSLPLPLLIMPEEHYASKAMCLWDMAQIGA
Sequences:
>Translated_206_residues MHSMTQGTPDDSREAFARIYQSNEWGSAESRSGLGSAYATTHRVRTVLPMLLRALDVKSMLDAPCGDFNWMRFVDLGKMH YIGCDIVPEVIETNRVRYADREFHVLDLAVEPLPNVDLIFSRDCLQHLTEPDIWRALRNFKKCGARWLFTSSHSTSAQDI ARETGGFGFLNLQQPPFSLPLPLLIMPEEHYASKAMCLWDMAQIGA >Mature_206_residues MHSMTQGTPDDSREAFARIYQSNEWGSAESRSGLGSAYATTHRVRTVLPMLLRALDVKSMLDAPCGDFNWMRFVDLGKMH YIGCDIVPEVIETNRVRYADREFHVLDLAVEPLPNVDLIFSRDCLQHLTEPDIWRALRNFKKCGARWLFTSSHSTSAQDI ARETGGFGFLNLQQPPFSLPLPLLIMPEEHYASKAMCLWDMAQIGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23365; Mature: 23365
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSMTQGTPDDSREAFARIYQSNEWGSAESRSGLGSAYATTHRVRTVLPMLLRALDVKSM CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDAPCGDFNWMRFVDLGKMHYIGCDIVPEVIETNRVRYADREFHVLDLAVEPLPNVDLIF HCCCCCCCCCHHHHHCCCEEEECHHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCEEE SRDCLQHLTEPDIWRALRNFKKCGARWLFTSSHSTSAQDIARETGGFGFLNLQQPPFSLP CHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCC LPLLIMPEEHYASKAMCLWDMAQIGA CCEEEECCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHSMTQGTPDDSREAFARIYQSNEWGSAESRSGLGSAYATTHRVRTVLPMLLRALDVKSM CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDAPCGDFNWMRFVDLGKMHYIGCDIVPEVIETNRVRYADREFHVLDLAVEPLPNVDLIF HCCCCCCCCCHHHHHCCCEEEECHHHHHHHHHCCCEEECCCCEEEEEEEECCCCCCCEEE SRDCLQHLTEPDIWRALRNFKKCGARWLFTSSHSTSAQDIARETGGFGFLNLQQPPFSLP CHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCC LPLLIMPEEHYASKAMCLWDMAQIGA CCEEEECCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA