| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470779
Identifier: 13470779
GI number: 13470779
Start: 420786
End: 421511
Strand: Reverse
Name: 13470779
Synonym: mll0573
Alternate gene names: NA
Gene position: 421511-420786 (Counterclockwise)
Preceding gene: 13470780
Following gene: 13470778
Centisome position: 5.99
GC content: 57.44
Gene sequence:
>726_bases ATGCGACCTCGGCTCGTTTTCACCGGCCCTACGCTATCGCATGCAGAGGCACAGCAGGTGGCCGACGTGATCTGTCTGGC GCCCGCGGTGCAAGGCTCGATCGTAGCTGCGGTGCAACGTTATGACCCCGCTGCAATTGTCATCATAGATGGCGCTTTCC AGGCTGAGCCGGCAGTGAGGCACAAGGAGATACTGTGGGCGATCAGCCAGGGCATCCCGGTGATAGGTGCTGGAAGCATG GGAGCCTTGCGAGCCGCGGAGCTTTACCCATACATGCACGGCGTTGGCCTTATCTACCGATGGTACCGCCGCTTTGCTGT CCTGCCTGATGACGCAGTGGCAGTGCTCTATGGTCCGAAGGCGGTGAATTTCTCGCCACTAACGCACGCTTTGGTTGATT TACGAATGACCGTCCGCGTTGCTTGGAGGCGGAACCTGATCTCCACCGATTTGTCCGGAAAGCTCGAGAGTGCGGCCCGG AACCTCAATTTTCGGGAACGCACGCTGTCGCGAATGGTCCGCGAGGCATTGCCGGAAGCCGGTGACCATGACTTGCAAAC CTGCCGGCAAATTCTCGCAGGAGCTTTCGTTCAGCAAAAGAAGCGCGACGCACTGTCAGCTCTGCAATTTATGCACGAAA ATGCATTGGTGCCGGCGGAATTGAAAAATTTCAGAATGACGGTCGGGTTCGTCCAAGATTTGGAGGACGCCGGGTTAGCA ATCTGA
Upstream 100 bases:
>100_bases AATGCCGTGTATCTGATCCGTCTAAACACCAGCCCTTGGAACCGACTGTCGGTCGTCAGGATGGTTATCCCCCAATTGTA CCCTTTGGTGGAGTGAGCGG
Downstream 100 bases:
>100_bases CGACAGAGTTGCCGCTGATACTTGGTGCATTTTACGAAGTACAGGCTTCGTGCTAGTGTCGCAGACTATGAGAGGGGCCG CGCAGTTGAACGCGCTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: TfuA Domain Protein Core; TfuA-Like Protein; Domain Protein; TfuA Domain Protein; TfuA Protein; Trifolitoxin Related Protein; Nifs Protein; TfuA Domain-Containing Protein Core; Antibiotic Resistance Protein; TfuA-Like; TfuA-Like Core
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRPRLVFTGPTLSHAEAQQVADVICLAPAVQGSIVAAVQRYDPAAIVIIDGAFQAEPAVRHKEILWAISQGIPVIGAGSM GALRAAELYPYMHGVGLIYRWYRRFAVLPDDAVAVLYGPKAVNFSPLTHALVDLRMTVRVAWRRNLISTDLSGKLESAAR NLNFRERTLSRMVREALPEAGDHDLQTCRQILAGAFVQQKKRDALSALQFMHENALVPAELKNFRMTVGFVQDLEDAGLA I
Sequences:
>Translated_241_residues MRPRLVFTGPTLSHAEAQQVADVICLAPAVQGSIVAAVQRYDPAAIVIIDGAFQAEPAVRHKEILWAISQGIPVIGAGSM GALRAAELYPYMHGVGLIYRWYRRFAVLPDDAVAVLYGPKAVNFSPLTHALVDLRMTVRVAWRRNLISTDLSGKLESAAR NLNFRERTLSRMVREALPEAGDHDLQTCRQILAGAFVQQKKRDALSALQFMHENALVPAELKNFRMTVGFVQDLEDAGLA I >Mature_241_residues MRPRLVFTGPTLSHAEAQQVADVICLAPAVQGSIVAAVQRYDPAAIVIIDGAFQAEPAVRHKEILWAISQGIPVIGAGSM GALRAAELYPYMHGVGLIYRWYRRFAVLPDDAVAVLYGPKAVNFSPLTHALVDLRMTVRVAWRRNLISTDLSGKLESAAR NLNFRERTLSRMVREALPEAGDHDLQTCRQILAGAFVQQKKRDALSALQFMHENALVPAELKNFRMTVGFVQDLEDAGLA I
Specific function: Unknown
COG id: COG3482
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26527; Mature: 26527
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRLVFTGPTLSHAEAQQVADVICLAPAVQGSIVAAVQRYDPAAIVIIDGAFQAEPAVR CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCHH HKEILWAISQGIPVIGAGSMGALRAAELYPYMHGVGLIYRWYRRFAVLPDDAVAVLYGPK HHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC AVNFSPLTHALVDLRMTVRVAWRRNLISTDLSGKLESAARNLNFRERTLSRMVREALPEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCC GDHDLQTCRQILAGAFVQQKKRDALSALQFMHENALVPAELKNFRMTVGFVQDLEDAGLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC I C >Mature Secondary Structure MRPRLVFTGPTLSHAEAQQVADVICLAPAVQGSIVAAVQRYDPAAIVIIDGAFQAEPAVR CCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEECCCCCCCCCHH HKEILWAISQGIPVIGAGSMGALRAAELYPYMHGVGLIYRWYRRFAVLPDDAVAVLYGPK HHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC AVNFSPLTHALVDLRMTVRVAWRRNLISTDLSGKLESAARNLNFRERTLSRMVREALPEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCC GDHDLQTCRQILAGAFVQQKKRDALSALQFMHENALVPAELKNFRMTVGFVQDLEDAGLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA