| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470727
Identifier: 13470727
GI number: 13470727
Start: 376031
End: 376918
Strand: Reverse
Name: 13470727
Synonym: mll0509
Alternate gene names: NA
Gene position: 376918-376031 (Counterclockwise)
Preceding gene: 13470731
Following gene: 13470726
Centisome position: 5.36
GC content: 65.2
Gene sequence:
>888_bases ATGACCGGCCACCAGGACGATTTCAGCCATCTCGACCGCGCCGGCCGCGCCACGGCTGATGTTGCGCGCAACCCACGTTT GACGGTCAATATCGTCGTCGGCGCCAGCATTCTGCTCGCCTGGTCGTCGCTGGCCACGATGGCGATTCGCGGTGCCGAGG CCCGGGGCAGCGCGCCTGGCGACGCACTCCTGCGTGGCCTGCCGCAATTGCCGCTGCCCGATTTCCTGGAGCCGTTCTTC GCGCTCTGCCTGTCGCCGGCGCCACTGGATGCAAGCATCGTCCCGCGTGCCCTGGCGCTGATCCTGATGTGGTTCCTGAT GGCCATCGCCGCGATGCTGCCATCCGCGGCACCGATGATCCGCACCTATTGCGAGATCGCCGATACGGCCCGGATCAAGG GCGAGCCGGTCGTCCATCCGCTGGTGCTGGTTGCCGGCTATCTCGGTGTCTGGCTCGCCGCCTCGATGCTGTTCACGGCC CTGACGCTCTGCGTGCATGCATTCGCCGCATCCGGCGAAATCTACGATCCGCTGCTTGGTGTTGCCGGGGCGCTCGCACT GCTGGTGGCAGGCCTCTACCAGTTTAGCGGCCTCAAGGAGGCCTGCCTGAAGAAATGCCGCAACCCGTTCTCGATCCTGT TTTCGAACTGGAGCGCCAAACCCGTCCGCGTCTTCCGGCTCGGTGCGGCGCAAGGCATCTGGTGCCTCGGCTGCTGCTGG GCGCTGATGCTGGTGATGTTCGCCGTCGGCGTGATGAACATCTTCTGGATGGCGCTGATCGGCCTGTTCACCCTGATTGA AAAACAGACGCCGGGCCGTCTTCCAACCCGGCTGGCCGGTGCGATACTGCTTGTCTGGGCAGCCGCGCTGCTAGTAGTCT CGCTGTGA
Upstream 100 bases:
>100_bases GCTTGCGATGCGAGGCGGGCCACCAGACCTGCCAATCGAGAAGCATATAGGTCAGTTCATGCGGATTGATCAACGCGGCG ATTCGGCTCATTCGGGTATC
Downstream 100 bases:
>100_bases GTGGGGGAAGTTCAATGACCGATCAGGGCTGGGCAATGAAAGGAGAGCTCGTACTCTCCTGCAATTGCACGGTTTTTTGC CCTTGCGTGCTGTCGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTGHQDDFSHLDRAGRATADVARNPRLTVNIVVGASILLAWSSLATMAIRGAEARGSAPGDALLRGLPQLPLPDFLEPFF ALCLSPAPLDASIVPRALALILMWFLMAIAAMLPSAAPMIRTYCEIADTARIKGEPVVHPLVLVAGYLGVWLAASMLFTA LTLCVHAFAASGEIYDPLLGVAGALALLVAGLYQFSGLKEACLKKCRNPFSILFSNWSAKPVRVFRLGAAQGIWCLGCCW ALMLVMFAVGVMNIFWMALIGLFTLIEKQTPGRLPTRLAGAILLVWAAALLVVSL
Sequences:
>Translated_295_residues MTGHQDDFSHLDRAGRATADVARNPRLTVNIVVGASILLAWSSLATMAIRGAEARGSAPGDALLRGLPQLPLPDFLEPFF ALCLSPAPLDASIVPRALALILMWFLMAIAAMLPSAAPMIRTYCEIADTARIKGEPVVHPLVLVAGYLGVWLAASMLFTA LTLCVHAFAASGEIYDPLLGVAGALALLVAGLYQFSGLKEACLKKCRNPFSILFSNWSAKPVRVFRLGAAQGIWCLGCCW ALMLVMFAVGVMNIFWMALIGLFTLIEKQTPGRLPTRLAGAILLVWAAALLVVSL >Mature_294_residues TGHQDDFSHLDRAGRATADVARNPRLTVNIVVGASILLAWSSLATMAIRGAEARGSAPGDALLRGLPQLPLPDFLEPFFA LCLSPAPLDASIVPRALALILMWFLMAIAAMLPSAAPMIRTYCEIADTARIKGEPVVHPLVLVAGYLGVWLAASMLFTAL TLCVHAFAASGEIYDPLLGVAGALALLVAGLYQFSGLKEACLKKCRNPFSILFSNWSAKPVRVFRLGAAQGIWCLGCCWA LMLVMFAVGVMNIFWMALIGLFTLIEKQTPGRLPTRLAGAILLVWAAALLVVSL
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31500; Mature: 31369
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGHQDDFSHLDRAGRATADVARNPRLTVNIVVGASILLAWSSLATMAIRGAEARGSAPG CCCCCCHHHHHHHHCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DALLRGLPQLPLPDFLEPFFALCLSPAPLDASIVPRALALILMWFLMAIAAMLPSAAPMI HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RTYCEIADTARIKGEPVVHPLVLVAGYLGVWLAASMLFTALTLCVHAFAASGEIYDPLLG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VAGALALLVAGLYQFSGLKEACLKKCRNPFSILFSNWSAKPVRVFRLGAAQGIWCLGCCW HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHH ALMLVMFAVGVMNIFWMALIGLFTLIEKQTPGRLPTRLAGAILLVWAAALLVVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGHQDDFSHLDRAGRATADVARNPRLTVNIVVGASILLAWSSLATMAIRGAEARGSAPG CCCCCHHHHHHHHCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DALLRGLPQLPLPDFLEPFFALCLSPAPLDASIVPRALALILMWFLMAIAAMLPSAAPMI HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RTYCEIADTARIKGEPVVHPLVLVAGYLGVWLAASMLFTALTLCVHAFAASGEIYDPLLG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VAGALALLVAGLYQFSGLKEACLKKCRNPFSILFSNWSAKPVRVFRLGAAQGIWCLGCCW HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHH ALMLVMFAVGVMNIFWMALIGLFTLIEKQTPGRLPTRLAGAILLVWAAALLVVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA