| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470708
Identifier: 13470708
GI number: 13470708
Start: 355481
End: 357823
Strand: Reverse
Name: 13470708
Synonym: mll0485
Alternate gene names: NA
Gene position: 357823-355481 (Counterclockwise)
Preceding gene: 13470709
Following gene: 13470707
Centisome position: 5.09
GC content: 55.36
Gene sequence:
>2343_bases ATGCGTGACGGAAGTTCCGTCAGGCTCCCACCTGAATTGCTCCCATATAGGCAGTTCGTAGTTTGGAGATTGGAGCAAAA ACCCGGCTCGCCCAAACCCGCGAAGATGCCTTATTCGGCCAATGGTGGAAGGGCAGATACGACCAACCCCGCCACATGGT CCGATTATCCAACGGCTGTTAGAGCGCTGGCGTCCGGGCAGTATGCCGGAATTGGATTTGTCTTTGCCGAAAACGATCCA TTTTTTGTGATCGATCTGGATGGATGTAGAGACGCCACGACTGGTGAGTTGTCAGCCGAAGCCGCTGCCATAACTCGAAT GTTTCCGAACGCTGCATGGGAGCTAAGTCAGAGCGGCGAGGGGATTCACATATTCGGGCGATGCGACAAGGTGGCGCTTG GTGGGTTTAGGAACAAGTGGGCCGGCTGGTGCGAATTTTACCGAACTAAGCGGTTCGTCGCTTTTGGTCCGGGTGGCATT CAAGGCAACATCGATATCGACTGGACGAACCAGTTAGCGATCCTCGTTCCAGCTCGCGGGGTTGGCGAGCAAGACGCCTC TCAAGAGGCCGTAGAGCGCGATCCGCGCTGGATCGGTCCAGACGACGACGAAGAGCTGTTGCGCCGCTTCCTCGCCTCCA CAGGCGGCACAAAGGCCAAGCTCCAGGCATCGCCGACGAACCTCCAACTGTGGGAGGCTCACGCGGCAGCGCTTGCGCAA TATTTTCCATCAGCGACAGGCAAGCCCTTCGATCATTCGAGCGCAGATCAAGCTTTGGCAAATGTCTTGGCCTTTTGGAC CGGTCGCGACTATGGGCGGATCATCCGACTGTTCGGTCGATCCGCACTAGGCAGGCGGGAGAAATGGACACGTCGCGCGG CCTACAGAAACTCGACCGTCAATGCCGCAGTACGATCCTGCCAAACCGTCTACGGCGGCAACGGTCAAGAACGTCGCTCC CGGCAGGTCCAAGAGAACGTCCGAATAGGAAGTGATATTGGGGCCGATATCCACACTCGCGTTATGACGCTTGAGGATAT GCTTCAGGACCTTTGGTTCATCCGCCACAGCAAATCGGGCGGAGCGATTGCCGATTCCAGAACGCTCAACGTTCTGCCGT TTGCCACGGCACAACGTGAATACTCAGCTTCCCGATATGAAGTCGCCGCCAGCACAATTGACCCGAAAACCGGCGACTTC AAAAAACGCTATCTGCCGGTGTTCAACCAGTGGGAGCAATCGCCATCAAGGAAGAGTGTCGACGTTATAACTTGGAAGCC GAACGGAGCTGTCATCTGCGAGGCGCCAGAAAGCCAAGGGGCAGGGTTCAACACTTGGCGCGGGTTTCAGCCGTATCGCT TACCAGATGGCTCTCAGTCACTTGTGGAGGTTTGGAGCGAGCATCTGGCCTACCTCATCCCGATTGAGGCGGAGCGCGTT CGTTTCGAGCAATGGCTTGCGCACATTGTCCAGCGTCCGGAAGAGCTTCCTCAATCTGCCTATCTCTTCATCACGGAGGA GACGGGAATAGGCCGCAACTGGCTATCGAGCGTCCTTGTCCGAGTTCTGCGCGGTTATGTGGCTGCCGGCATCGACATAC AGGAAATGCTGGATGGAACATTCAACGGTCGATTGAGCCGAAAATTGCTCGCCGTCGTGGATGAAGCCAAAGCAGGAATG CAGGGATATGGTCGCTGGAGCCACAGTGAAAAACTAAAGTCGATGATCAATCCGGAAATGCGCCGGATCAACGAAAAGCA CGGCTTGGAATTTGTCGAATGGAACTGCTGTCGATGGCTCTTTTTTAGCAACAATTGGGACGCACTTCCGTTCGACGCTT CGGACCGACGGTTCAACGTCGTTGCCAATCCAACGCACAGGCAATCGCCTGACTACTACGAGCGAATTTATAGCCAGATT GCCAATCCGGACTTTATCTCCGCCGTGCGCAAGAGGTTGGAGCTTTTGGACATATCGGGGTTCAAACCCGGCGCTATTCC CGACATGAACGAAGCTAAGCGCAAGGCCCTCGGCGCGATGGCTTCCGACTTGGACAATTTGCTCGCAGCATTCAGAGACG AATGGCCGGGACCGTTGGCAGAGCGCAGCGACGTCATCAATTATCTACATGTGAGCATCGCCAAACTGCCCGGCGAGAAA ACGATCAACAAATTGATCGAACAAGCGGGGATGAAGCTAGTTGAGCGAATTTCGATAGGACCGAACAAATATCGCTTCGT CGTCGTGCGGGACTACACCGCTCAGCAAATCGAAACAAATCCACAGTGGGCATACGCCGAAGCGGTGAACGCTCGCGGAA AATATGGCTTCAGACAGGGTTAG
Upstream 100 bases:
>100_bases ATCAAGGACAATCCGTCTTTTCCGAGGAAGAAGAAGATCGGTCCGAGGCTGGTTGGCTTCCTTCGAAGCGACATCGAAAC TTACATTGGGAGCCTTCCGG
Downstream 100 bases:
>100_bases ACAGGGTCTTAAAGCCTATAGGTAAAAACCTGAATTTCTCAGGAGAGGACTAAGACCCTGTCTAACCCTGTCTATGGCAA ATTATGTAATTTTAAGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 780; Mature: 780
Protein sequence:
>780_residues MRDGSSVRLPPELLPYRQFVVWRLEQKPGSPKPAKMPYSANGGRADTTNPATWSDYPTAVRALASGQYAGIGFVFAENDP FFVIDLDGCRDATTGELSAEAAAITRMFPNAAWELSQSGEGIHIFGRCDKVALGGFRNKWAGWCEFYRTKRFVAFGPGGI QGNIDIDWTNQLAILVPARGVGEQDASQEAVERDPRWIGPDDDEELLRRFLASTGGTKAKLQASPTNLQLWEAHAAALAQ YFPSATGKPFDHSSADQALANVLAFWTGRDYGRIIRLFGRSALGRREKWTRRAAYRNSTVNAAVRSCQTVYGGNGQERRS RQVQENVRIGSDIGADIHTRVMTLEDMLQDLWFIRHSKSGGAIADSRTLNVLPFATAQREYSASRYEVAASTIDPKTGDF KKRYLPVFNQWEQSPSRKSVDVITWKPNGAVICEAPESQGAGFNTWRGFQPYRLPDGSQSLVEVWSEHLAYLIPIEAERV RFEQWLAHIVQRPEELPQSAYLFITEETGIGRNWLSSVLVRVLRGYVAAGIDIQEMLDGTFNGRLSRKLLAVVDEAKAGM QGYGRWSHSEKLKSMINPEMRRINEKHGLEFVEWNCCRWLFFSNNWDALPFDASDRRFNVVANPTHRQSPDYYERIYSQI ANPDFISAVRKRLELLDISGFKPGAIPDMNEAKRKALGAMASDLDNLLAAFRDEWPGPLAERSDVINYLHVSIAKLPGEK TINKLIEQAGMKLVERISIGPNKYRFVVVRDYTAQQIETNPQWAYAEAVNARGKYGFRQG
Sequences:
>Translated_780_residues MRDGSSVRLPPELLPYRQFVVWRLEQKPGSPKPAKMPYSANGGRADTTNPATWSDYPTAVRALASGQYAGIGFVFAENDP FFVIDLDGCRDATTGELSAEAAAITRMFPNAAWELSQSGEGIHIFGRCDKVALGGFRNKWAGWCEFYRTKRFVAFGPGGI QGNIDIDWTNQLAILVPARGVGEQDASQEAVERDPRWIGPDDDEELLRRFLASTGGTKAKLQASPTNLQLWEAHAAALAQ YFPSATGKPFDHSSADQALANVLAFWTGRDYGRIIRLFGRSALGRREKWTRRAAYRNSTVNAAVRSCQTVYGGNGQERRS RQVQENVRIGSDIGADIHTRVMTLEDMLQDLWFIRHSKSGGAIADSRTLNVLPFATAQREYSASRYEVAASTIDPKTGDF KKRYLPVFNQWEQSPSRKSVDVITWKPNGAVICEAPESQGAGFNTWRGFQPYRLPDGSQSLVEVWSEHLAYLIPIEAERV RFEQWLAHIVQRPEELPQSAYLFITEETGIGRNWLSSVLVRVLRGYVAAGIDIQEMLDGTFNGRLSRKLLAVVDEAKAGM QGYGRWSHSEKLKSMINPEMRRINEKHGLEFVEWNCCRWLFFSNNWDALPFDASDRRFNVVANPTHRQSPDYYERIYSQI ANPDFISAVRKRLELLDISGFKPGAIPDMNEAKRKALGAMASDLDNLLAAFRDEWPGPLAERSDVINYLHVSIAKLPGEK TINKLIEQAGMKLVERISIGPNKYRFVVVRDYTAQQIETNPQWAYAEAVNARGKYGFRQG >Mature_780_residues MRDGSSVRLPPELLPYRQFVVWRLEQKPGSPKPAKMPYSANGGRADTTNPATWSDYPTAVRALASGQYAGIGFVFAENDP FFVIDLDGCRDATTGELSAEAAAITRMFPNAAWELSQSGEGIHIFGRCDKVALGGFRNKWAGWCEFYRTKRFVAFGPGGI QGNIDIDWTNQLAILVPARGVGEQDASQEAVERDPRWIGPDDDEELLRRFLASTGGTKAKLQASPTNLQLWEAHAAALAQ YFPSATGKPFDHSSADQALANVLAFWTGRDYGRIIRLFGRSALGRREKWTRRAAYRNSTVNAAVRSCQTVYGGNGQERRS RQVQENVRIGSDIGADIHTRVMTLEDMLQDLWFIRHSKSGGAIADSRTLNVLPFATAQREYSASRYEVAASTIDPKTGDF KKRYLPVFNQWEQSPSRKSVDVITWKPNGAVICEAPESQGAGFNTWRGFQPYRLPDGSQSLVEVWSEHLAYLIPIEAERV RFEQWLAHIVQRPEELPQSAYLFITEETGIGRNWLSSVLVRVLRGYVAAGIDIQEMLDGTFNGRLSRKLLAVVDEAKAGM QGYGRWSHSEKLKSMINPEMRRINEKHGLEFVEWNCCRWLFFSNNWDALPFDASDRRFNVVANPTHRQSPDYYERIYSQI ANPDFISAVRKRLELLDISGFKPGAIPDMNEAKRKALGAMASDLDNLLAAFRDEWPGPLAERSDVINYLHVSIAKLPGEK TINKLIEQAGMKLVERISIGPNKYRFVVVRDYTAQQIETNPQWAYAEAVNARGKYGFRQG
Specific function: Unknown
COG id: COG4983
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87673; Mature: 87673
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDGSSVRLPPELLPYRQFVVWRLEQKPGSPKPAKMPYSANGGRADTTNPATWSDYPTAV CCCCCCCCCCHHHHCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RALASGQYAGIGFVFAENDPFFVIDLDGCRDATTGELSAEAAAITRMFPNAAWELSQSGE HHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCC GIHIFGRCDKVALGGFRNKWAGWCEFYRTKRFVAFGPGGIQGNIDIDWTNQLAILVPARG CEEEEECCCEEECCCCCHHHHHHHHHHHHCEEEEECCCCEECCEEEEECCCEEEEEECCC VGEQDASQEAVERDPRWIGPDDDEELLRRFLASTGGTKAKLQASPTNLQLWEAHAAALAQ CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHH YFPSATGKPFDHSSADQALANVLAFWTGRDYGRIIRLFGRSALGRREKWTRRAAYRNSTV HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH NAAVRSCQTVYGGNGQERRSRQVQENVRIGSDIGADIHTRVMTLEDMLQDLWFIRHSKSG HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GAIADSRTLNVLPFATAQREYSASRYEVAASTIDPKTGDFKKRYLPVFNQWEQSPSRKSV CCEECCCEEEEEECHHHHHHHCCCHHEEEHHCCCCCCCCHHHHHCCHHHHHHCCCCCCCE DVITWKPNGAVICEAPESQGAGFNTWRGFQPYRLPDGSQSLVEVWSEHLAYLIPIEAERV EEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCHHHH RFEQWLAHIVQRPEELPQSAYLFITEETGIGRNWLSSVLVRVLRGYVAAGIDIQEMLDGT HHHHHHHHHHHCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC FNGRLSRKLLAVVDEAKAGMQGYGRWSHSEKLKSMINPEMRRINEKHGLEFVEWNCCRWL CCCHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCEEEEECEEEEE FFSNNWDALPFDASDRRFNVVANPTHRQSPDYYERIYSQIANPDFISAVRKRLELLDISG EECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC FKPGAIPDMNEAKRKALGAMASDLDNLLAAFRDEWPGPLAERSDVINYLHVSIAKLPGEK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH TINKLIEQAGMKLVERISIGPNKYRFVVVRDYTAQQIETNPQWAYAEAVNARGKYGFRQG HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCEEHHHHHCCCCCCCCCCC >Mature Secondary Structure MRDGSSVRLPPELLPYRQFVVWRLEQKPGSPKPAKMPYSANGGRADTTNPATWSDYPTAV CCCCCCCCCCHHHHCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RALASGQYAGIGFVFAENDPFFVIDLDGCRDATTGELSAEAAAITRMFPNAAWELSQSGE HHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCC GIHIFGRCDKVALGGFRNKWAGWCEFYRTKRFVAFGPGGIQGNIDIDWTNQLAILVPARG CEEEEECCCEEECCCCCHHHHHHHHHHHHCEEEEECCCCEECCEEEEECCCEEEEEECCC VGEQDASQEAVERDPRWIGPDDDEELLRRFLASTGGTKAKLQASPTNLQLWEAHAAALAQ CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHH YFPSATGKPFDHSSADQALANVLAFWTGRDYGRIIRLFGRSALGRREKWTRRAAYRNSTV HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH NAAVRSCQTVYGGNGQERRSRQVQENVRIGSDIGADIHTRVMTLEDMLQDLWFIRHSKSG HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC GAIADSRTLNVLPFATAQREYSASRYEVAASTIDPKTGDFKKRYLPVFNQWEQSPSRKSV CCEECCCEEEEEECHHHHHHHCCCHHEEEHHCCCCCCCCHHHHHCCHHHHHHCCCCCCCE DVITWKPNGAVICEAPESQGAGFNTWRGFQPYRLPDGSQSLVEVWSEHLAYLIPIEAERV EEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCHHHH RFEQWLAHIVQRPEELPQSAYLFITEETGIGRNWLSSVLVRVLRGYVAAGIDIQEMLDGT HHHHHHHHHHHCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC FNGRLSRKLLAVVDEAKAGMQGYGRWSHSEKLKSMINPEMRRINEKHGLEFVEWNCCRWL CCCHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCEEEEECEEEEE FFSNNWDALPFDASDRRFNVVANPTHRQSPDYYERIYSQIANPDFISAVRKRLELLDISG EECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC FKPGAIPDMNEAKRKALGAMASDLDNLLAAFRDEWPGPLAERSDVINYLHVSIAKLPGEK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH TINKLIEQAGMKLVERISIGPNKYRFVVVRDYTAQQIETNPQWAYAEAVNARGKYGFRQG HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCCCEEHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA