| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470658
Identifier: 13470658
GI number: 13470658
Start: 311880
End: 312605
Strand: Reverse
Name: 13470658
Synonym: mll0429
Alternate gene names: NA
Gene position: 312605-311880 (Counterclockwise)
Preceding gene: 13470659
Following gene: 13470657
Centisome position: 4.44
GC content: 62.53
Gene sequence:
>726_bases ATGCCGAACACCTCTGTTCGGGCGGCCGCCGAAGGCATGCCCAAGATTACCCGCCGCCACGCTCTCATGATGTCTTCGGG GGCGATTGTCGCTCTCGCGGTGGCGCCAAACGCTCATGCCGCTGTCGCCGTCGATGATGTCTCCGAAGTCCGCGCGCTCA TCAAGGCGCACCGCGACGCAGAAGCCGCATTCGAAAAGGCCCTGGTGGCAGACGGCGAAATGGAAGAGGCCTATTTCGCG GCGCACCCTGAAAGGGAGCTGCTTATCCCGCTCTCGATCGGCGGCGCTCAATCGCTCTATATCCGCTTCGAGGCACAGGA ATATCTAGATGATTGCGTGAAGGCGATTGCCTCCACCTATAACGCCAAGCGCCAGAGCCTTGCCGCACTGCGCCAGATTG CTCCTGCCTTGGCTAACGACGCCGTGGCAACACTGGACCGTGCCGAGGCGGTGGACCTTTCGACCCTCGATGCGACGTGG AAAGCAGAGCAAGCCAAGCGCAAGGCCTTCGGCTGGGGGAAAACCCGTCGCGCCTACAACTCCACCTGCGATGCGATGCA CCGCGCTCTCGATGCCATATGCACCTATCGTTGCTCGTCGCCGGCCGCCAACCGCGCCCGCGCTGCCTACCTGCTCAAGG TAACGGGTGGCAAGTTCGCGGATCTTGAAAACTATCAGGTCCGCGCGCTGCTCAGGTCCATGCGGGCACGGGAGGCGCAA TCATGA
Upstream 100 bases:
>100_bases TTATCTGGCTAGTAATTTTTCATAGTTTGCTGTTGACGGCAAGCTAATTCTGATTCATGGTGAACTGGTAAACATAACCA GTTAACAAGGAATTTCCCAC
Downstream 100 bases:
>100_bases CCCGGAACCGTTTCGTGGACCAAGGCGACATGACTGCCGACCAATTGGAGTCATGCAGTTACGATCTGCTGGCCATTCTG CACCTTGTAAAAGCCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPNTSVRAAAEGMPKITRRHALMMSSGAIVALAVAPNAHAAVAVDDVSEVRALIKAHRDAEAAFEKALVADGEMEEAYFA AHPERELLIPLSIGGAQSLYIRFEAQEYLDDCVKAIASTYNAKRQSLAALRQIAPALANDAVATLDRAEAVDLSTLDATW KAEQAKRKAFGWGKTRRAYNSTCDAMHRALDAICTYRCSSPAANRARAAYLLKVTGGKFADLENYQVRALLRSMRAREAQ S
Sequences:
>Translated_241_residues MPNTSVRAAAEGMPKITRRHALMMSSGAIVALAVAPNAHAAVAVDDVSEVRALIKAHRDAEAAFEKALVADGEMEEAYFA AHPERELLIPLSIGGAQSLYIRFEAQEYLDDCVKAIASTYNAKRQSLAALRQIAPALANDAVATLDRAEAVDLSTLDATW KAEQAKRKAFGWGKTRRAYNSTCDAMHRALDAICTYRCSSPAANRARAAYLLKVTGGKFADLENYQVRALLRSMRAREAQ S >Mature_240_residues PNTSVRAAAEGMPKITRRHALMMSSGAIVALAVAPNAHAAVAVDDVSEVRALIKAHRDAEAAFEKALVADGEMEEAYFAA HPERELLIPLSIGGAQSLYIRFEAQEYLDDCVKAIASTYNAKRQSLAALRQIAPALANDAVATLDRAEAVDLSTLDATWK AEQAKRKAFGWGKTRRAYNSTCDAMHRALDAICTYRCSSPAANRARAAYLLKVTGGKFADLENYQVRALLRSMRAREAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26141; Mature: 26010
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTSVRAAAEGMPKITRRHALMMSSGAIVALAVAPNAHAAVAVDDVSEVRALIKAHRDA CCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCH EAAFEKALVADGEMEEAYFAAHPERELLIPLSIGGAQSLYIRFEAQEYLDDCVKAIASTY HHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHH NAKRQSLAALRQIAPALANDAVATLDRAEAVDLSTLDATWKAEQAKRKAFGWGKTRRAYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCHHHHHHH STCDAMHRALDAICTYRCSSPAANRARAAYLLKVTGGKFADLENYQVRALLRSMRAREAQ HHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC S C >Mature Secondary Structure PNTSVRAAAEGMPKITRRHALMMSSGAIVALAVAPNAHAAVAVDDVSEVRALIKAHRDA CCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCH EAAFEKALVADGEMEEAYFAAHPERELLIPLSIGGAQSLYIRFEAQEYLDDCVKAIASTY HHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHH NAKRQSLAALRQIAPALANDAVATLDRAEAVDLSTLDATWKAEQAKRKAFGWGKTRRAYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCHHHHHHH STCDAMHRALDAICTYRCSSPAANRARAAYLLKVTGGKFADLENYQVRALLRSMRAREAQ HHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA