| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is glpG [C]
Identifier: 13470470
GI number: 13470470
Start: 128607
End: 129320
Strand: Direct
Name: glpG [C]
Synonym: mlr0187
Alternate gene names: 13470470
Gene position: 128607-129320 (Clockwise)
Preceding gene: 13470465
Following gene: 13470471
Centisome position: 1.83
GC content: 63.03
Gene sequence:
>714_bases ATGCCGCCGCCTGCGCGCGAACCGGTGTTCAATCTGCCGCCGATCGTACTGGCGGTGATCGGCATTTGCGCGGCCGTCTT CCTGCTGCAGCAATATGTGCTGAACGACGCGCAGCAGATAACGCTGCTCTACGATGGAGCCTTCATTCCAGTCCTCTATA CCGGGCAATACGGCTTCGACTGGTTCCTGTTCACACGACCCTTCACCTATGCCTTCATGCATGGCGGGTTTGCCCATATC GCCATCAATATGGTGTGGCTCGCCGCCTTTGGTTCGCCACTAGCCAATCGGCTCGGCGGGCTCCGGTTCGCTCTGTTCTT CGCTGTTACCGGACTGGCTTCCGTGGCGCTCTTCTGGGCCATGCACCCCTATGGTGAAGCACCGCTGGTCGGCGCCTCCG GTGCCATATCAGGCATGATGGGTGCCGCGGCGCGCTTCGGTTTCCGCACCGACCGTTCGGCCGGCAAGGCGGCCTTCGCC GGCCCCGTGCTGCCGATCTCGCTTGTCGTGCGTTCGCGCGGTGTCGTGGTCTTCCTTGCCGTGTGGATGATCATCAACCT CGCCACAGGCCTGCTCGGATTTGCGCCTGGAGTAGATGGGCAGATCGCCTGGGAGGCTCATATTGGTGGCTTCGTCGCCG GCTTTTTCGGCCTGCGCTGGTTCGATCGGCGATGGCCGCCGCCCGAATGGGAGACCGCCGACCGTCGCACTTGA
Upstream 100 bases:
>100_bases ATGCTCGCCAGATCGAACTAGCCCAAGATCGAACCACCACCGAGTGCGATTGCAGATGAGCGAGCCGCAAAATCCAACCG AGGCCGAACCGGCCGAAAGC
Downstream 100 bases:
>100_bases AATGCAACCGATCACGGCGCACGATGTTCACTCTTACGTGAAAACCGGTCTGGGCAGGGACCGGCAGGCGAAGCAGAGGA GGACGCCATGACGGTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Rhomboid-Like Protein; Rhombiod Family Transmembrane Protein; Peptidase Protein; S54 Family Peptidase; Peptidase
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MPPPAREPVFNLPPIVLAVIGICAAVFLLQQYVLNDAQQITLLYDGAFIPVLYTGQYGFDWFLFTRPFTYAFMHGGFAHI AINMVWLAAFGSPLANRLGGLRFALFFAVTGLASVALFWAMHPYGEAPLVGASGAISGMMGAAARFGFRTDRSAGKAAFA GPVLPISLVVRSRGVVVFLAVWMIINLATGLLGFAPGVDGQIAWEAHIGGFVAGFFGLRWFDRRWPPPEWETADRRT
Sequences:
>Translated_237_residues MPPPAREPVFNLPPIVLAVIGICAAVFLLQQYVLNDAQQITLLYDGAFIPVLYTGQYGFDWFLFTRPFTYAFMHGGFAHI AINMVWLAAFGSPLANRLGGLRFALFFAVTGLASVALFWAMHPYGEAPLVGASGAISGMMGAAARFGFRTDRSAGKAAFA GPVLPISLVVRSRGVVVFLAVWMIINLATGLLGFAPGVDGQIAWEAHIGGFVAGFFGLRWFDRRWPPPEWETADRRT >Mature_236_residues PPPAREPVFNLPPIVLAVIGICAAVFLLQQYVLNDAQQITLLYDGAFIPVLYTGQYGFDWFLFTRPFTYAFMHGGFAHIA INMVWLAAFGSPLANRLGGLRFALFFAVTGLASVALFWAMHPYGEAPLVGASGAISGMMGAAARFGFRTDRSAGKAAFAG PVLPISLVVRSRGVVVFLAVWMIINLATGLLGFAPGVDGQIAWEAHIGGFVAGFFGLRWFDRRWPPPEWETADRRT
Specific function: Not Yet Known. [C]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25745; Mature: 25614
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPAREPVFNLPPIVLAVIGICAAVFLLQQYVLNDAQQITLLYDGAFIPVLYTGQYGFD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCE WFLFTRPFTYAFMHGGFAHIAINMVWLAAFGSPLANRLGGLRFALFFAVTGLASVALFWA EEEECCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MHPYGEAPLVGASGAISGMMGAAARFGFRTDRSAGKAAFAGPVLPISLVVRSRGVVVFLA HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCHHHHHH VWMIINLATGLLGFAPGVDGQIAWEAHIGGFVAGFFGLRWFDRRWPPPEWETADRRT HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PPPAREPVFNLPPIVLAVIGICAAVFLLQQYVLNDAQQITLLYDGAFIPVLYTGQYGFD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCE WFLFTRPFTYAFMHGGFAHIAINMVWLAAFGSPLANRLGGLRFALFFAVTGLASVALFWA EEEECCCHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MHPYGEAPLVGASGAISGMMGAAARFGFRTDRSAGKAAFAGPVLPISLVVRSRGVVVFLA HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCHHHHHH VWMIINLATGLLGFAPGVDGQIAWEAHIGGFVAGFFGLRWFDRRWPPPEWETADRRT HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA