| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470447
Identifier: 13470447
GI number: 13470447
Start: 110176
End: 110562
Strand: Direct
Name: 13470447
Synonym: mlr0156
Alternate gene names: NA
Gene position: 110176-110562 (Clockwise)
Preceding gene: 13470445
Following gene: 13470448
Centisome position: 1.57
GC content: 63.31
Gene sequence:
>387_bases ATGAACGGCCTGACTCGTCTCATCGCTGGAACAGCCATCACACTGTTCGCCTGCGGTCTCGTCATGGCCGAGCCATTGAC GCTCGCCATCGCCAAGGCCGCGGTCGTATCCGATCAAGCGTCGGGACAGAGGGCACTCAACCTGAAGATGACACCGGACA GCGCAAAGGCATTCGCCGACTTCACCAAGGCGAATGTCGGGAAGGTGGTCGATCTCAGCGTCGACGGTGCCGTGGTGGCG TCGCCGCGCCTGGTCGAACCCATCCTAGGCGGTGAGGTGATGCTCAGCGGCGCCTTCGCCGCGGGCGAACTCCAGCGCCT CGCGGAACGGATTTCGGCGGGAGGTGCGAAAGTCACGGTCGAGGTGAAGGCTGAACAGCCTTTGTGA
Upstream 100 bases:
>100_bases GTTTGCCGTTGGCAGAACCGCGGCCTGCAAGCGCAGGACAGCCGGCATTGCCGGGAAAATGTCGGCGTGCAAAATGGCCG TCTTGCAAGGAAAAATCGTG
Downstream 100 bases:
>100_bases AGGCTGGGCAGGCCCGTTCGCTGTTTGGCGCTGGTCAAAACCAGGCAGGCTTGGCACAGTCGCGCAAACAGGAGTCCCTT CATGGCAAAGAAGCCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNGLTRLIAGTAITLFACGLVMAEPLTLAIAKAAVVSDQASGQRALNLKMTPDSAKAFADFTKANVGKVVDLSVDGAVVA SPRLVEPILGGEVMLSGAFAAGELQRLAERISAGGAKVTVEVKAEQPL
Sequences:
>Translated_128_residues MNGLTRLIAGTAITLFACGLVMAEPLTLAIAKAAVVSDQASGQRALNLKMTPDSAKAFADFTKANVGKVVDLSVDGAVVA SPRLVEPILGGEVMLSGAFAAGELQRLAERISAGGAKVTVEVKAEQPL >Mature_128_residues MNGLTRLIAGTAITLFACGLVMAEPLTLAIAKAAVVSDQASGQRALNLKMTPDSAKAFADFTKANVGKVVDLSVDGAVVA SPRLVEPILGGEVMLSGAFAAGELQRLAERISAGGAKVTVEVKAEQPL
Specific function: Unknown
COG id: COG0342
COG function: function code U; Preprotein translocase subunit SecD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13020; Mature: 13020
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLTRLIAGTAITLFACGLVMAEPLTLAIAKAAVVSDQASGQRALNLKMTPDSAKAFAD CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH FTKANVGKVVDLSVDGAVVASPRLVEPILGGEVMLSGAFAAGELQRLAERISAGGAKVTV HHHCCCCEEEEEECCCEEEECCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEE EVKAEQPL EEECCCCC >Mature Secondary Structure MNGLTRLIAGTAITLFACGLVMAEPLTLAIAKAAVVSDQASGQRALNLKMTPDSAKAFAD CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHH FTKANVGKVVDLSVDGAVVASPRLVEPILGGEVMLSGAFAAGELQRLAERISAGGAKVTV HHHCCCCEEEEEECCCEEEECCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEE EVKAEQPL EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA