Click here to switch to the map view.

The map label for this gene is nudK [H]

Identifier: 13470443

GI number: 13470443

Start: 105672

End: 106250

Strand: Direct

Name: nudK [H]

Synonym: mlr0150

Alternate gene names: 13470443

Gene position: 105672-106250 (Clockwise)

Preceding gene: 13470438

Following gene: 13470445

Centisome position: 1.5

GC content: 62.18

Gene sequence:

>579_bases
ATGGAAGATCGTATTCGTATCCGTTCGGAAGAGGTTCTTTCCGACGACTGGGCGGTGCTGAAAAAGACCGTGCTCGACTA
TCGCCGGCGCGACGGGCAATGGGAGACGCAAATCCGCCAGACCTACGATCGCGGCGATGGCGCGGTGATTTTGCCTTACG
ACCCCCAGCGTTCGACGGTGCTCCTGGTGCGCCAGTTCCGCTATCCCGCCTACGTCACTGGCCACCGCGAACCGCTGATC
GAGGCCTGTGCCGGGCTGCTCGACGAAAACGATCCGGAAACCGCCATCCGCAAGGAAGCCGAGGAAGAGCTCGGCTACCG
GCTGAAGGATATTGAGCGGCTGTTTTCGCCTTATATGAGCCCGGGCAGCGTCACCGAGCGGCTGTGGTTCTTCATTGCCC
GCTATTCGCCCGCCGACCGCATCTCGGCCGGCGGCGGCGCTCCGGAAGAGGGCGAGGATATCGAGGTTCTGGAAATGCCG
CTCGACGAGGCGCTGGCCGGCATCGCCGACGGTCGCATCGTCGATGCCAAGACGATTATCCTGATCCAGCATCTGAAGCT
GAACCCGATGAAGGCCTAG

Upstream 100 bases:

>100_bases
ACGAGAGAGTGAAACGCTTGCTGGACCAATCGCTGCCCCAATTGCGCCGGCGCCGTTTCGCGGCTACGCCTGCGCCGGCC
GGCAAATACCGAGGTATCCA

Downstream 100 bases:

>100_bases
TCTCTCGAAGCTCGCTGGGTATTGCCTTGCTAGCTGTGCTGCGGACAGGCCGGCACGTCCATTTCGCGGATGAAGGTGCG
CAAGGCTTCCATATCCCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEDRIRIRSEEVLSDDWAVLKKTVLDYRRRDGQWETQIRQTYDRGDGAVILPYDPQRSTVLLVRQFRYPAYVTGHREPLI
EACAGLLDENDPETAIRKEAEEELGYRLKDIERLFSPYMSPGSVTERLWFFIARYSPADRISAGGGAPEEGEDIEVLEMP
LDEALAGIADGRIVDAKTIILIQHLKLNPMKA

Sequences:

>Translated_192_residues
MEDRIRIRSEEVLSDDWAVLKKTVLDYRRRDGQWETQIRQTYDRGDGAVILPYDPQRSTVLLVRQFRYPAYVTGHREPLI
EACAGLLDENDPETAIRKEAEEELGYRLKDIERLFSPYMSPGSVTERLWFFIARYSPADRISAGGGAPEEGEDIEVLEMP
LDEALAGIADGRIVDAKTIILIQHLKLNPMKA
>Mature_192_residues
MEDRIRIRSEEVLSDDWAVLKKTVLDYRRRDGQWETQIRQTYDRGDGAVILPYDPQRSTVLLVRQFRYPAYVTGHREPLI
EACAGLLDENDPETAIRKEAEEELGYRLKDIERLFSPYMSPGSVTERLWFFIARYSPADRISAGGGAPEEGEDIEVLEMP
LDEALAGIADGRIVDAKTIILIQHLKLNPMKA

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=191, Percent_Identity=46.5968586387435, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1789412, Length=166, Percent_Identity=33.7349397590361, Blast_Score=87, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21950; Mature: 21950

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRIRIRSEEVLSDDWAVLKKTVLDYRRRDGQWETQIRQTYDRGDGAVILPYDPQRSTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCE
LLVRQFRYPAYVTGHREPLIEACAGLLDENDPETAIRKEAEEELGYRLKDIERLFSPYMS
EHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PGSVTERLWFFIARYSPADRISAGGGAPEEGEDIEVLEMPLDEALAGIADGRIVDAKTII
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCEEECHHHEE
LIQHLKLNPMKA
EEEECCCCCCCC
>Mature Secondary Structure
MEDRIRIRSEEVLSDDWAVLKKTVLDYRRRDGQWETQIRQTYDRGDGAVILPYDPQRSTV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCCE
LLVRQFRYPAYVTGHREPLIEACAGLLDENDPETAIRKEAEEELGYRLKDIERLFSPYMS
EHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCC
PGSVTERLWFFIARYSPADRISAGGGAPEEGEDIEVLEMPLDEALAGIADGRIVDAKTII
CCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCEEECHHHEE
LIQHLKLNPMKA
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA