| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470428
Identifier: 13470428
GI number: 13470428
Start: 90601
End: 91572
Strand: Direct
Name: 13470428
Synonym: mlr0133
Alternate gene names: NA
Gene position: 90601-91572 (Clockwise)
Preceding gene: 13470427
Following gene: 13470429
Centisome position: 1.29
GC content: 63.68
Gene sequence:
>972_bases GTGGAGCTGGAACTCAAATTTCTGCTTGTCGGCTTTGCCTGCGCGGTCTCCGGCATGCTGTCGCTCATCACCTTCGTGAA ATGGCGGGAGGTGCAGGCGCTCAGCCGCTGGTTGCCGACGCCGGGAAAGATCATCTCGTCGCGCGTCGAGGCGCGTGAGG TCAGAAGCTCGGGCGCTGGCTCGGACAGCACCGATACCACGGAAATGCGAAATTTCCCGGCAATCACCTTCGAATACAAA GTCGGCGGCAAGAAATTTCAAAGCTCGCGCTACAGCGTGAAGGAAAATTTGGGGAACTTTGAAGTCCGCGAAACCCTTGC GCAGTTTCCCCGCGGCGCGGAGGTGACCGTCTTCTACAATCCGGCTGATCCGAGCAAAGCCGTCATCGAGCGCACCATGC CGGACGGCGCCTTCAAGTTCATGTTCCAGCTCTCGGCCGGGTTGGTGATCGGCACGGCGGTTCTGGTGTTTTCCGTTGGC GGCGTGCTCGAGGCGATCCGGCCGCATCTGCCCAAGCCGCAGAATCTCGGCGCCGCCGCACTGCTGCTGTTCATGGGCCT GTTCGCCCTGCGCATGGGCTTCGCCCAGAAGTCGCTCGCCGAGCAGGCGGCAAAATGGCCGGTCGCCGCCGGCCGCATCG ATGCGTCAGGCCTGCAGGCGCTGCGGACCCATTCAAGCTATCAACGCTGGCGCACCGTTTTCAAATCCCGCATCGTCTAC AGCTATGGCGTCGCCGGCCAGTGCTACAGCGCCGACCGCGTCACCTTCGGCGCCACGGTCACGGCCTCGCTGCCCGGCCT CGTCAGCGCTCAGGCACGAAACTATGCCGAGGGCGGCAAGGTCGACGTGCACTACGACCCTGCCAATCCTGGCTCGGCGG TGCTCGAATGCCGGGTGCGTGGACTCTGGCTGCTATGGGTCTGTTCGGCAGGATTTCTCGGCGGCGCTGCCTGGCTCGTC GGGCTGGTGTGA
Upstream 100 bases:
>100_bases GCGTTACGCCCGACCGCTCATCTCTCGACTTTGCGAATAAGCGAGACATTGCCGCCGCAGTGCTGTCTAGTGCCTGTTCC TGCACTCCGGGGGGATCAGG
Downstream 100 bases:
>100_bases GGACAGGTTTTGGCTTCCACAACGCTTTCCCGGAGATATCCAGTGATCGTTCGCAAACTGGCCTGCGTTTTCCTGGGACG GCCCGATCCAGCTGGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MELELKFLLVGFACAVSGMLSLITFVKWREVQALSRWLPTPGKIISSRVEAREVRSSGAGSDSTDTTEMRNFPAITFEYK VGGKKFQSSRYSVKENLGNFEVRETLAQFPRGAEVTVFYNPADPSKAVIERTMPDGAFKFMFQLSAGLVIGTAVLVFSVG GVLEAIRPHLPKPQNLGAAALLLFMGLFALRMGFAQKSLAEQAAKWPVAAGRIDASGLQALRTHSSYQRWRTVFKSRIVY SYGVAGQCYSADRVTFGATVTASLPGLVSAQARNYAEGGKVDVHYDPANPGSAVLECRVRGLWLLWVCSAGFLGGAAWLV GLV
Sequences:
>Translated_323_residues MELELKFLLVGFACAVSGMLSLITFVKWREVQALSRWLPTPGKIISSRVEAREVRSSGAGSDSTDTTEMRNFPAITFEYK VGGKKFQSSRYSVKENLGNFEVRETLAQFPRGAEVTVFYNPADPSKAVIERTMPDGAFKFMFQLSAGLVIGTAVLVFSVG GVLEAIRPHLPKPQNLGAAALLLFMGLFALRMGFAQKSLAEQAAKWPVAAGRIDASGLQALRTHSSYQRWRTVFKSRIVY SYGVAGQCYSADRVTFGATVTASLPGLVSAQARNYAEGGKVDVHYDPANPGSAVLECRVRGLWLLWVCSAGFLGGAAWLV GLV >Mature_323_residues MELELKFLLVGFACAVSGMLSLITFVKWREVQALSRWLPTPGKIISSRVEAREVRSSGAGSDSTDTTEMRNFPAITFEYK VGGKKFQSSRYSVKENLGNFEVRETLAQFPRGAEVTVFYNPADPSKAVIERTMPDGAFKFMFQLSAGLVIGTAVLVFSVG GVLEAIRPHLPKPQNLGAAALLLFMGLFALRMGFAQKSLAEQAAKWPVAAGRIDASGLQALRTHSSYQRWRTVFKSRIVY SYGVAGQCYSADRVTFGATVTASLPGLVSAQARNYAEGGKVDVHYDPANPGSAVLECRVRGLWLLWVCSAGFLGGAAWLV GLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35034; Mature: 35034
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELELKFLLVGFACAVSGMLSLITFVKWREVQALSRWLPTPGKIISSRVEAREVRSSGAG CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC SDSTDTTEMRNFPAITFEYKVGGKKFQSSRYSVKENLGNFEVRETLAQFPRGAEVTVFYN CCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEC PADPSKAVIERTMPDGAFKFMFQLSAGLVIGTAVLVFSVGGVLEAIRPHLPKPQNLGAAA CCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LLLFMGLFALRMGFAQKSLAEQAAKWPVAAGRIDASGLQALRTHSSYQRWRTVFKSRIVY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SYGVAGQCYSADRVTFGATVTASLPGLVSAQARNYAEGGKVDVHYDPANPGSAVLECRVR EECCCCCCCCCCCEEECEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH GLWLLWVCSAGFLGGAAWLVGLV HHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MELELKFLLVGFACAVSGMLSLITFVKWREVQALSRWLPTPGKIISSRVEAREVRSSGAG CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC SDSTDTTEMRNFPAITFEYKVGGKKFQSSRYSVKENLGNFEVRETLAQFPRGAEVTVFYN CCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEC PADPSKAVIERTMPDGAFKFMFQLSAGLVIGTAVLVFSVGGVLEAIRPHLPKPQNLGAAA CCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LLLFMGLFALRMGFAQKSLAEQAAKWPVAAGRIDASGLQALRTHSSYQRWRTVFKSRIVY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SYGVAGQCYSADRVTFGATVTASLPGLVSAQARNYAEGGKVDVHYDPANPGSAVLECRVR EECCCCCCCCCCCEEECEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH GLWLLWVCSAGFLGGAAWLVGLV HHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA