| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is pcbC [H]
Identifier: 13470412
GI number: 13470412
Start: 79141
End: 80169
Strand: Reverse
Name: pcbC [H]
Synonym: mll0111
Alternate gene names: 13470412
Gene position: 80169-79141 (Counterclockwise)
Preceding gene: 13470415
Following gene: 13470409
Centisome position: 1.14
GC content: 64.24
Gene sequence:
>1029_bases GTGACGCAAGACATTGAAACCATCGGCATTGCGGATCTGTTCGGGCCGCCCTCGCCCGGCCGCGACCGCGCCGACATCAG CATCATGGCCGCCGCCTCGGGCATTGGCTTCATGGCGGTTCGGGATTTTCCCGGAGACGCCTGGCTGATGCCGGAACGCC GAGCGCAATTGCTGCACATCTTCGCCCTTCCCGACACCGAGAAGCAGAAATTGCTGCGCTGGAATTTCGACCGCACCAGG AAGAATGTCTATCGCGGCTGGTTTTCACTGCAGCCGACAGCCGTTTCCTACAAGGAAGGCATCGACATGGGGCCGGATAT CGCCGATGCAGCCGGCGTTTCGGCGTCCGACGATCCGCTGTGCGAGCCGACGCCATTGCCGACTGAAGATGCCCTGCCCG GCTGGCGCGCGGCGGCGGCGGACTATTATCGCGCGATGGAGACGGTCAGCAATGCGTTGATGCGGTCGATCGCGCGCGGG CTTGACCTGCCGGAAACGATCTTCGATTCGTATTTCGAGCATGGCATCTCGACCCTGCGCCTGATCCGCTATCCCCTGCG CGACGCCAATGCAGGCATCGACATCAGCGGGCCTGAGTTCTCGGTGGTCCACAAGGGCGAGACGCGTACGATCATCGGCC GCGAGCATGCCGATTCCGGGTTCGTCACCTTGCTGGCGCAGGACGGCGTCGAAGGCTTGCAGGCCAAAAACCTCGCCGGC GAATGGATCGACGTGCCGCCCGCCAACAGCACGCTGGCGGTCAATTTCGGCCAGTTGCTGGAGCGCTGGACCGGCGGGCG TGTGCGGGCGACGCGGCACCGGGTGATCGCACCGAAGACGGCGCGGTTCTCGATCCCGTTTTTCTACGAACCGCGTGTCG ACGCCGAGATCGCCCCGCTGCCGCTGAGTGGCGCCGAGCCCTTCGAGCCGTTTCTCTACGGCGACTATCTGTGGGAGGCG GCGACTAATTTCGTGGAGATGGCCGGTATCAAGCATCTCAGGCAACCGCGCCGCGCCAAGGCTTCCTGA
Upstream 100 bases:
>100_bases GATCCATGATGAGAGTATGCAATCGAGGTAAATGGCGGGACCGATTGGGTCAATTGAAAAGCTTTGATACAGTTTCATCG ATTACCGTGATGGGGCGGCC
Downstream 100 bases:
>100_bases GCCTGGGCGCGATCGTCGGCGGGGCTGTGCTGTATCAAAGCGTCCTGGCGAGATCTTCGAGCTGGTCGGTGCACTGGCCC CAGCCCACGTGAAAACCCAT
Product: oxidoreductase
Products: NA
Alternate protein names: IPNS [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHIFALPDTEKQKLLRWNFDRTR KNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPLCEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARG LDLPETIFDSYFEHGISTLRLIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPLPLSGAEPFEPFLYGDYLWEA ATNFVEMAGIKHLRQPRRAKAS
Sequences:
>Translated_342_residues MTQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHIFALPDTEKQKLLRWNFDRTR KNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPLCEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARG LDLPETIFDSYFEHGISTLRLIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPLPLSGAEPFEPFLYGDYLWEA ATNFVEMAGIKHLRQPRRAKAS >Mature_341_residues TQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHIFALPDTEKQKLLRWNFDRTRK NVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPLCEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARGL DLPETIFDSYFEHGISTLRLIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAGE WIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPLPLSGAEPFEPFLYGDYLWEAA TNFVEMAGIKHLRQPRRAKAS
Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002057 - InterPro: IPR002283 - InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: =1.21.3.1 [H]
Molecular weight: Translated: 37831; Mature: 37700
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHI CCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCHHHCEEEEE FALPDTEKQKLLRWNFDRTRKNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPL EECCCCHHHHHHHCCHHHHHHHHHHHHEECCCCEEHHHHCCCCCCCCHHHCCCCCCCCCC CEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARGLDLPETIFDSYFEHGISTLR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG HHHHCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHHHCCCC EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPL CEEECCCCCCEEEEEHHHHHHHHCCCCEEECCCEEECCCCCEEECCEEECCCCCCEECCC PLSGAEPFEPFLYGDYLWEAATNFVEMAGIKHLRQPRRAKAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure TQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHI CCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCHHHCEEEEE FALPDTEKQKLLRWNFDRTRKNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPL EECCCCHHHHHHHCCHHHHHHHHHHHHEECCCCEEHHHHCCCCCCCCHHHCCCCCCCCCC CEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARGLDLPETIFDSYFEHGISTLR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG HHHHCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHHHCCCC EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPL CEEECCCCCCEEEEEHHHHHHHHCCCCEEECCCEEECCCCCEEECCEEECCCCCCEECCC PLSGAEPFEPFLYGDYLWEAATNFVEMAGIKHLRQPRRAKAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3130293 [H]