Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is pcbC [H]

Identifier: 13470412

GI number: 13470412

Start: 79141

End: 80169

Strand: Reverse

Name: pcbC [H]

Synonym: mll0111

Alternate gene names: 13470412

Gene position: 80169-79141 (Counterclockwise)

Preceding gene: 13470415

Following gene: 13470409

Centisome position: 1.14

GC content: 64.24

Gene sequence:

>1029_bases
GTGACGCAAGACATTGAAACCATCGGCATTGCGGATCTGTTCGGGCCGCCCTCGCCCGGCCGCGACCGCGCCGACATCAG
CATCATGGCCGCCGCCTCGGGCATTGGCTTCATGGCGGTTCGGGATTTTCCCGGAGACGCCTGGCTGATGCCGGAACGCC
GAGCGCAATTGCTGCACATCTTCGCCCTTCCCGACACCGAGAAGCAGAAATTGCTGCGCTGGAATTTCGACCGCACCAGG
AAGAATGTCTATCGCGGCTGGTTTTCACTGCAGCCGACAGCCGTTTCCTACAAGGAAGGCATCGACATGGGGCCGGATAT
CGCCGATGCAGCCGGCGTTTCGGCGTCCGACGATCCGCTGTGCGAGCCGACGCCATTGCCGACTGAAGATGCCCTGCCCG
GCTGGCGCGCGGCGGCGGCGGACTATTATCGCGCGATGGAGACGGTCAGCAATGCGTTGATGCGGTCGATCGCGCGCGGG
CTTGACCTGCCGGAAACGATCTTCGATTCGTATTTCGAGCATGGCATCTCGACCCTGCGCCTGATCCGCTATCCCCTGCG
CGACGCCAATGCAGGCATCGACATCAGCGGGCCTGAGTTCTCGGTGGTCCACAAGGGCGAGACGCGTACGATCATCGGCC
GCGAGCATGCCGATTCCGGGTTCGTCACCTTGCTGGCGCAGGACGGCGTCGAAGGCTTGCAGGCCAAAAACCTCGCCGGC
GAATGGATCGACGTGCCGCCCGCCAACAGCACGCTGGCGGTCAATTTCGGCCAGTTGCTGGAGCGCTGGACCGGCGGGCG
TGTGCGGGCGACGCGGCACCGGGTGATCGCACCGAAGACGGCGCGGTTCTCGATCCCGTTTTTCTACGAACCGCGTGTCG
ACGCCGAGATCGCCCCGCTGCCGCTGAGTGGCGCCGAGCCCTTCGAGCCGTTTCTCTACGGCGACTATCTGTGGGAGGCG
GCGACTAATTTCGTGGAGATGGCCGGTATCAAGCATCTCAGGCAACCGCGCCGCGCCAAGGCTTCCTGA

Upstream 100 bases:

>100_bases
GATCCATGATGAGAGTATGCAATCGAGGTAAATGGCGGGACCGATTGGGTCAATTGAAAAGCTTTGATACAGTTTCATCG
ATTACCGTGATGGGGCGGCC

Downstream 100 bases:

>100_bases
GCCTGGGCGCGATCGTCGGCGGGGCTGTGCTGTATCAAAGCGTCCTGGCGAGATCTTCGAGCTGGTCGGTGCACTGGCCC
CAGCCCACGTGAAAACCCAT

Product: oxidoreductase

Products: NA

Alternate protein names: IPNS [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHIFALPDTEKQKLLRWNFDRTR
KNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPLCEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARG
LDLPETIFDSYFEHGISTLRLIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG
EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPLPLSGAEPFEPFLYGDYLWEA
ATNFVEMAGIKHLRQPRRAKAS

Sequences:

>Translated_342_residues
MTQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHIFALPDTEKQKLLRWNFDRTR
KNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPLCEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARG
LDLPETIFDSYFEHGISTLRLIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG
EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPLPLSGAEPFEPFLYGDYLWEA
ATNFVEMAGIKHLRQPRRAKAS
>Mature_341_residues
TQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHIFALPDTEKQKLLRWNFDRTRK
NVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPLCEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARGL
DLPETIFDSYFEHGISTLRLIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAGE
WIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPLPLSGAEPFEPFLYGDYLWEAA
TNFVEMAGIKHLRQPRRAKAS

Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]

COG id: COG3491

COG function: function code R; Isopenicillin N synthase and related dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002057
- InterPro:   IPR002283
- InterPro:   IPR005123 [H]

Pfam domain/function: PF03171 2OG-FeII_Oxy [H]

EC number: =1.21.3.1 [H]

Molecular weight: Translated: 37831; Mature: 37700

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHI
CCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCHHHCEEEEE
FALPDTEKQKLLRWNFDRTRKNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPL
EECCCCHHHHHHHCCHHHHHHHHHHHHEECCCCEEHHHHCCCCCCCCHHHCCCCCCCCCC
CEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARGLDLPETIFDSYFEHGISTLR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG
HHHHCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHHHCCCC
EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPL
CEEECCCCCCEEEEEHHHHHHHHCCCCEEECCCEEECCCCCEEECCEEECCCCCCEECCC
PLSGAEPFEPFLYGDYLWEAATNFVEMAGIKHLRQPRRAKAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure 
TQDIETIGIADLFGPPSPGRDRADISIMAAASGIGFMAVRDFPGDAWLMPERRAQLLHI
CCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCHHHCEEEEE
FALPDTEKQKLLRWNFDRTRKNVYRGWFSLQPTAVSYKEGIDMGPDIADAAGVSASDDPL
EECCCCHHHHHHHCCHHHHHHHHHHHHEECCCCEEHHHHCCCCCCCCHHHCCCCCCCCCC
CEPTPLPTEDALPGWRAAAADYYRAMETVSNALMRSIARGLDLPETIFDSYFEHGISTLR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LIRYPLRDANAGIDISGPEFSVVHKGETRTIIGREHADSGFVTLLAQDGVEGLQAKNLAG
HHHHCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCHHHHHHCCCC
EWIDVPPANSTLAVNFGQLLERWTGGRVRATRHRVIAPKTARFSIPFFYEPRVDAEIAPL
CEEECCCCCCEEEEEHHHHHHHHCCCCEEECCCEEECCCCCEEECCEEECCCCCCEECCC
PLSGAEPFEPFLYGDYLWEAATNFVEMAGIKHLRQPRRAKAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3130293 [H]