| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ybbK [H]
Identifier: 13470406
GI number: 13470406
Start: 73615
End: 74118
Strand: Reverse
Name: ybbK [H]
Synonym: mll0105
Alternate gene names: 13470406
Gene position: 74118-73615 (Counterclockwise)
Preceding gene: 13470407
Following gene: 13470405
Centisome position: 1.05
GC content: 62.1
Gene sequence:
>504_bases ATGGAAAGGGTTCTCGTCTCCGCCTGCCTGCTCGGCAGCCATGTCCGCTATAACGGCTCCTACCGGCTGGACGGCCATCC GGTACTGACACGGTGGCAGGCGGAAGGACGGGTTGTGCAAATCTGTCCAGAGGTCGCCGCAGGCTTCTCCACGCCGCGTC CTGCAGCGGAAATTCACGGTACAGCCGACGCTGTGCTCGACGGCCAGGGTCGAGTGGTCGAGCAGACGGGAAGCGATGTG ACTGCACTTTATCTCGAAGCCGGGCAGCTTGCACTCGAACTCGCGCGCGAAACGGGATGCCGCTATGCGGTTCTTACCGA CGGCAGTCCGTCCTGCGGCAGCAGCTTCGTCTTCGACGGCAGTTTTTCAGGCAAGCGCGTAGCCGGTCGCGGCACGACCG CCGCTCTATTGGAGGCCAATGGCATTCGCGTCTTTTCGGAAGACAGTATCGGCGACCTTGATGCTCTCCTGAATAGGCCC GGTTCAGTGGAGACTACGGCCTGA
Upstream 100 bases:
>100_bases GCCTGTCGCTGGAGGTTGCCACGCCGGCCGAAGCGCGTGAGATGCTGGCGCTAAAGGGTGGCGACCGGGTGGCTTTCTAG AAGCAAGGGAGGGAGCTGAC
Downstream 100 bases:
>100_bases TCCATGACAGACAAGGTCCAGACCAAGACCAGCGATATCGTCATCCGCCCCGGACGAATCGATGACGCCGAAACCATCCA CGCCGCGCTTCTCAAACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MERVLVSACLLGSHVRYNGSYRLDGHPVLTRWQAEGRVVQICPEVAAGFSTPRPAAEIHGTADAVLDGQGRVVEQTGSDV TALYLEAGQLALELARETGCRYAVLTDGSPSCGSSFVFDGSFSGKRVAGRGTTAALLEANGIRVFSEDSIGDLDALLNRP GSVETTA
Sequences:
>Translated_167_residues MERVLVSACLLGSHVRYNGSYRLDGHPVLTRWQAEGRVVQICPEVAAGFSTPRPAAEIHGTADAVLDGQGRVVEQTGSDV TALYLEAGQLALELARETGCRYAVLTDGSPSCGSSFVFDGSFSGKRVAGRGTTAALLEANGIRVFSEDSIGDLDALLNRP GSVETTA >Mature_167_residues MERVLVSACLLGSHVRYNGSYRLDGHPVLTRWQAEGRVVQICPEVAAGFSTPRPAAEIHGTADAVLDGQGRVVEQTGSDV TALYLEAGQLALELARETGCRYAVLTDGSPSCGSSFVFDGSFSGKRVAGRGTTAALLEANGIRVFSEDSIGDLDALLNRP GSVETTA
Specific function: Unknown
COG id: COG1683
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007553 [H]
Pfam domain/function: PF04463 DUF523 [H]
EC number: NA
Molecular weight: Translated: 17514; Mature: 17514
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVLVSACLLGSHVRYNGSYRLDGHPVLTRWQAEGRVVQICPEVAAGFSTPRPAAEIHG CCHHHHHHHHHCCCEEECCCEEECCCCEEEEEECCCCEEEECCHHHCCCCCCCCCHHCCC TADAVLDGQGRVVEQTGSDVTALYLEAGQLALELARETGCRYAVLTDGSPSCGSSFVFDG CCCEEECCCCEEEEECCCCEEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECC SFSGKRVAGRGTTAALLEANGIRVFSEDSIGDLDALLNRPGSVETTA CCCCCEEECCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCEECC >Mature Secondary Structure MERVLVSACLLGSHVRYNGSYRLDGHPVLTRWQAEGRVVQICPEVAAGFSTPRPAAEIHG CCHHHHHHHHHCCCEEECCCEEECCCCEEEEEECCCCEEEECCHHHCCCCCCCCCHHCCC TADAVLDGQGRVVEQTGSDVTALYLEAGQLALELARETGCRYAVLTDGSPSCGSSFVFDG CCCEEECCCCEEEEECCCCEEEEEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECC SFSGKRVAGRGTTAALLEANGIRVFSEDSIGDLDALLNRPGSVETTA CCCCCEEECCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]