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The map label for this gene is ppdD [C]

Identifier: 134302671

GI number: 134302671

Start: 1744938

End: 1745345

Strand: Direct

Name: ppdD [C]

Synonym: FTW_1859

Alternate gene names: 134302671

Gene position: 1744938-1745345 (Clockwise)

Preceding gene: 134302670

Following gene: 134302672

Centisome position: 91.91

GC content: 36.52

Gene sequence:

>408_bases
ATGTTAGATAAAAAAGGTTTTTCTTTAGTTGAGTTAATAGTGGTAATAGCAATTATAGCTATTCTTGCATCTATAGGTAT
ACCTATGTATAACAACTACATACTTAGAAATCATCGAACTGAAGCAACTTCTGAGCTGCTTTCAGCAGCCAGTGCGGCTG
ATAATTACGAAATCCGTTTTGGCTCATTTCCTTCAGGAAGTAATATCGATAGTTTTTATCATACAAATACACAAAATAGC
TATTATAGCCTAGCGTACTGCTCTGGAGAACATCAGTGCCCTAATGTAAGCTATGTAATAACTGCTACAGCACAAGGTAC
CCAAACAGCTGATACGCCGTGTGCAAATATAGAGATTGAAGTTAAAGGTGGAATAGTAAACAAGACTCCTGCTGAATGCT
GGAATTAA

Upstream 100 bases:

>100_bases
AGATGCGGTAAGAAAATATCCAGAACAATATCTATGGCAGCATCGTCGCTATAGAACCAGACCAAATGGTGAGCCACAAA
TATACTAAGGCTTTTATTAA

Downstream 100 bases:

>100_bases
TTTATTTTATTGTAAAAAACGTGTTGAGGATTAATAAAAATGGCTAGTTATAGTACTAATGAGTTTAAAGGCGGCTTAAA
AGTTTTAATTGATGGTAACC

Product: type IV pili fiber building block protein

Products: NA

Alternate protein names: Type IV Pili Pilus Assembly Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MLDKKGFSLVELIVVIAIIAILASIGIPMYNNYILRNHRTEATSELLSAASAADNYEIRFGSFPSGSNIDSFYHTNTQNS
YYSLAYCSGEHQCPNVSYVITATAQGTQTADTPCANIEIEVKGGIVNKTPAECWN

Sequences:

>Translated_135_residues
MLDKKGFSLVELIVVIAIIAILASIGIPMYNNYILRNHRTEATSELLSAASAADNYEIRFGSFPSGSNIDSFYHTNTQNS
YYSLAYCSGEHQCPNVSYVITATAQGTQTADTPCANIEIEVKGGIVNKTPAECWN
>Mature_135_residues
MLDKKGFSLVELIVVIAIIAILASIGIPMYNNYILRNHRTEATSELLSAASAADNYEIRFGSFPSGSNIDSFYHTNTQNS
YYSLAYCSGEHQCPNVSYVITATAQGTQTADTPCANIEIEVKGGIVNKTPAECWN

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14691; Mature: 14691

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKKGFSLVELIVVIAIIAILASIGIPMYNNYILRNHRTEATSELLSAASAADNYEIRF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEE
GSFPSGSNIDSFYHTNTQNSYYSLAYCSGEHQCPNVSYVITATAQGTQTADTPCANIEIE
CCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEE
VKGGIVNKTPAECWN
ECCCCCCCCCHHHCC
>Mature Secondary Structure
MLDKKGFSLVELIVVIAIIAILASIGIPMYNNYILRNHRTEATSELLSAASAADNYEIRF
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEE
GSFPSGSNIDSFYHTNTQNSYYSLAYCSGEHQCPNVSYVITATAQGTQTADTPCANIEIE
CCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEE
VKGGIVNKTPAECWN
ECCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA