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The map label for this gene is yrdA [H]

Identifier: 134302645

GI number: 134302645

Start: 1719265

End: 1719804

Strand: Direct

Name: yrdA [H]

Synonym: FTW_1828

Alternate gene names: 134302645

Gene position: 1719265-1719804 (Clockwise)

Preceding gene: 134302644

Following gene: 134302646

Centisome position: 90.56

GC content: 37.04

Gene sequence:

>540_bases
ATGTCTAGATGTATAAGAAGCTTTAATGGTAAATATCCTAAAGTAGCTGATTCAGCTTATGTTGATGAGTCAGCAGCAGT
AATTGGTGATGTTATCTTAAAAGAAGATTCATCTATATGGTCACAGGTCAGTGTAAGAGGAGATCTCTTAACAATCACTA
TTGGTAAAGGCACTAACATACAAGATTGTAGCACACTTCATACTACTGAATATCCTAAAGATTCTGGTCAAGGCTTTGCC
TTAACTATAGGAGACTACGTGACAGTAGGACATGGCGTTGTATTACATGGCTGTGAGATAAAAAATAACTGTCTAATAGG
TATGGGTTCGATAGTTCTCGATGGAGCAGTAGTAGAGCCTTGGGTTTTTCTCGGTGCTGGCAGTTTGGTACCACCAGGAA
AAACTCTTGAGTCAGGTTATATGTATTTAGGTTCACCAGCTAAAAAGGTTAGACCAATAAGTGAGCATGAAAGACAAATT
ATTAAAGAAAATGCTGAACACTATGTCAAAGTTAAAAATAGATACAAAGCGCAGATTTAG

Upstream 100 bases:

>100_bases
ATGATAATGGTTATGCACAACCTTTTAGTAAGAATAAAAAGATTAAATTTGAGAGTTATAATTTGATATCATTAAGGGAT
GATAAAAGTAAGGATCAGCT

Downstream 100 bases:

>100_bases
TTTACTTATTGCTTTAGTACTAATTATCTCATTATCATCTTGTGCTACAACGCAAACTAATGTTACAACTAAAACAGTTT
TTAATCAAGAGACTACTTAC

Product: acyltransferase/carbonic anhydrase family 3 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSRCIRSFNGKYPKVADSAYVDESAAVIGDVILKEDSSIWSQVSVRGDLLTITIGKGTNIQDCSTLHTTEYPKDSGQGFA
LTIGDYVTVGHGVVLHGCEIKNNCLIGMGSIVLDGAVVEPWVFLGAGSLVPPGKTLESGYMYLGSPAKKVRPISEHERQI
IKENAEHYVKVKNRYKAQI

Sequences:

>Translated_179_residues
MSRCIRSFNGKYPKVADSAYVDESAAVIGDVILKEDSSIWSQVSVRGDLLTITIGKGTNIQDCSTLHTTEYPKDSGQGFA
LTIGDYVTVGHGVVLHGCEIKNNCLIGMGSIVLDGAVVEPWVFLGAGSLVPPGKTLESGYMYLGSPAKKVRPISEHERQI
IKENAEHYVKVKNRYKAQI
>Mature_178_residues
SRCIRSFNGKYPKVADSAYVDESAAVIGDVILKEDSSIWSQVSVRGDLLTITIGKGTNIQDCSTLHTTEYPKDSGQGFAL
TIGDYVTVGHGVVLHGCEIKNNCLIGMGSIVLDGAVVEPWVFLGAGSLVPPGKTLESGYMYLGSPAKKVRPISEHERQII
KENAEHYVKVKNRYKAQI

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=50.561797752809, Blast_Score=180, Evalue=4e-47,
Organism=Escherichia coli, GI1787667, Length=172, Percent_Identity=33.7209302325581, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI87081681, Length=171, Percent_Identity=33.9181286549708, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19415; Mature: 19284

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRCIRSFNGKYPKVADSAYVDESAAVIGDVILKEDSSIWSQVSVRGDLLTITIGKGTNI
CCCHHHHHCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHEEEECCCEEEEEECCCCCC
QDCSTLHTTEYPKDSGQGFALTIGDYVTVGHGVVLHGCEIKNNCLIGMGSIVLDGAVVEP
CCCCCCCCCCCCCCCCCEEEEEECCEEEECCCEEEEEEEECCCEEEEECCEEECCCCCCC
WVFLGAGSLVPPGKTLESGYMYLGSPAKKVRPISEHERQIIKENAEHYVKVKNRYKAQI
EEEECCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHHHHHHHHCHHHEEEECCCEECCC
>Mature Secondary Structure 
SRCIRSFNGKYPKVADSAYVDESAAVIGDVILKEDSSIWSQVSVRGDLLTITIGKGTNI
CCHHHHHCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHEEEECCCEEEEEECCCCCC
QDCSTLHTTEYPKDSGQGFALTIGDYVTVGHGVVLHGCEIKNNCLIGMGSIVLDGAVVEP
CCCCCCCCCCCCCCCCCEEEEEECCEEEECCCEEEEEEEECCCEEEEECCEEECCCCCCC
WVFLGAGSLVPPGKTLESGYMYLGSPAKKVRPISEHERQIIKENAEHYVKVKNRYKAQI
EEEECCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHHHHHHHHCHHHEEEECCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]