Click here to switch to the map view.

The map label for this gene is ydjC [C]

Identifier: 134302469

GI number: 134302469

Start: 1520984

End: 1521790

Strand: Direct

Name: ydjC [C]

Synonym: FTW_1617

Alternate gene names: 134302469

Gene position: 1520984-1521790 (Clockwise)

Preceding gene: 134302467

Following gene: 134302474

Centisome position: 80.12

GC content: 29.74

Gene sequence:

>807_bases
ATGGTTAAAAAAATAATAATTTGTGCAGATGACTTTGGCATGAGTGATAATATAAATAGTGCTATTATTAACCTCTTGGA
AAAAAAGGTTATTAATGCCACTAGCTGTATGCCAAATATGCCTGCATTCAAATTAGGAATTGCTCAATTAAAAAAAATAT
ATAATGATTTTAGTCATGTTGGTATACATTTAAATTTAACTGAAGGTAATGCTTTTACAAATCCAAAATCTATAACTAGA
AATGGCAAATTTTTGTCACTATCAAAACTTCTTGTCAAATCAAAACTTAGAGCAATAAATTATGATGATGTTTATAATGA
GCTGAAAGCTCAAATAAATAACTTTATCGAAGACTGGGGCGCGCTGCCAGATTTTATTGATGGTCATCAACATGTTCATC
ATTTTCCAATAATTAGAAAAGCTGTTATAAATCTATATAAAGATTTCAATATGTACACTAAGCAGACCTATATCCGCTCA
ACATATAAAATGGATAAATCGGACTTTAAGTCACTAATAATCTATCGTAGCGGTGCAAAAAAGTTCTATAATATGCTAAT
AAAAAACAATATCAAGCATAACTCAAGTTTTGCCGGAGTTTATTCGTTAGAAAGTGATAATCAAGACTTTAGAAAAGTTA
TTCTAGAGGCTTATGCCAAAATTAAAGATGGAGGTATAATAATGTGCCATCCCGCTGCGGATATTGATATAAAAGATCCA
ATATCACAGTCACGCATTAAAGAATTTGCTTACTTTAACTCCAAACAAGCACTACAAGATCAAAAAGATCATAATATTGT
ACTATAA

Upstream 100 bases:

>100_bases
ACAAATACAAAATATATTAACCTTAATTAATGCTATTATAACCATGAAAGTATAAAATACCTAGTAGTAAAGGTGATAAT
TCAATTAGCAAATAAAAGTT

Downstream 100 bases:

>100_bases
ATAACTGCTATTTTACTTTCTTATAAATATAACGAGGATTAATGGTATCTGCTAAAAGTTTGTTTTCAAAGTCAACTCTA
ACCAAGACACCTAGCGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MVKKIIICADDFGMSDNINSAIINLLEKKVINATSCMPNMPAFKLGIAQLKKIYNDFSHVGIHLNLTEGNAFTNPKSITR
NGKFLSLSKLLVKSKLRAINYDDVYNELKAQINNFIEDWGALPDFIDGHQHVHHFPIIRKAVINLYKDFNMYTKQTYIRS
TYKMDKSDFKSLIIYRSGAKKFYNMLIKNNIKHNSSFAGVYSLESDNQDFRKVILEAYAKIKDGGIIMCHPAADIDIKDP
ISQSRIKEFAYFNSKQALQDQKDHNIVL

Sequences:

>Translated_268_residues
MVKKIIICADDFGMSDNINSAIINLLEKKVINATSCMPNMPAFKLGIAQLKKIYNDFSHVGIHLNLTEGNAFTNPKSITR
NGKFLSLSKLLVKSKLRAINYDDVYNELKAQINNFIEDWGALPDFIDGHQHVHHFPIIRKAVINLYKDFNMYTKQTYIRS
TYKMDKSDFKSLIIYRSGAKKFYNMLIKNNIKHNSSFAGVYSLESDNQDFRKVILEAYAKIKDGGIIMCHPAADIDIKDP
ISQSRIKEFAYFNSKQALQDQKDHNIVL
>Mature_268_residues
MVKKIIICADDFGMSDNINSAIINLLEKKVINATSCMPNMPAFKLGIAQLKKIYNDFSHVGIHLNLTEGNAFTNPKSITR
NGKFLSLSKLLVKSKLRAINYDDVYNELKAQINNFIEDWGALPDFIDGHQHVHHFPIIRKAVINLYKDFNMYTKQTYIRS
TYKMDKSDFKSLIIYRSGAKKFYNMLIKNNIKHNSSFAGVYSLESDNQDFRKVILEAYAKIKDGGIIMCHPAADIDIKDP
ISQSRIKEFAYFNSKQALQDQKDHNIVL

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Escherichia coli, GI1788028, Length=234, Percent_Identity=25.2136752136752, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 30710; Mature: 30710

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKIIICADDFGMSDNINSAIINLLEKKVINATSCMPNMPAFKLGIAQLKKIYNDFSHV
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHE
GIHLNLTEGNAFTNPKSITRNGKFLSLSKLLVKSKLRAINYDDVYNELKAQINNFIEDWG
EEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
ALPDFIDGHQHVHHFPIIRKAVINLYKDFNMYTKQTYIRSTYKMDKSDFKSLIIYRSGAK
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCHH
KFYNMLIKNNIKHNSSFAGVYSLESDNQDFRKVILEAYAKIKDGGIIMCHPAADIDIKDP
HHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
ISQSRIKEFAYFNSKQALQDQKDHNIVL
HHHHHHHHHHHCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MVKKIIICADDFGMSDNINSAIINLLEKKVINATSCMPNMPAFKLGIAQLKKIYNDFSHV
CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHE
GIHLNLTEGNAFTNPKSITRNGKFLSLSKLLVKSKLRAINYDDVYNELKAQINNFIEDWG
EEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
ALPDFIDGHQHVHHFPIIRKAVINLYKDFNMYTKQTYIRSTYKMDKSDFKSLIIYRSGAK
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCHH
KFYNMLIKNNIKHNSSFAGVYSLESDNQDFRKVILEAYAKIKDGGIIMCHPAADIDIKDP
HHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
ISQSRIKEFAYFNSKQALQDQKDHNIVL
HHHHHHHHHHHCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]