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The map label for this gene is rsgA [H]

Identifier: 134302439

GI number: 134302439

Start: 1489272

End: 1490159

Strand: Direct

Name: rsgA [H]

Synonym: FTW_1587

Alternate gene names: 134302439

Gene position: 1489272-1490159 (Clockwise)

Preceding gene: 134302435

Following gene: 134302440

Centisome position: 78.45

GC content: 32.55

Gene sequence:

>888_bases
TTGCAAGCAAAAGTCATAACAAATTTTGGTGGTAATATTTGTGTAAAGCTCACCACTGGTGAAAAAGTTTCTGCATTACA
GCGTAGTCATCTAAAAGGTGAACTTACAGTTGGCGATAATGTTGAGCTAGAATACACAAATGCTACTTATGTAATTACTA
AACTACTTGATAGAAAAAATCTCATATCACGTCCCAATCAGTACCAGCGTAAAAATAAAAATATTGCTGCTAATATTGAT
AGCGCTGTAATTATTATCACGCATTCACCTGCTCCCGTTGAACATTACATTGATAGATATTTAGCTGCTCTTCACAATAG
TGATATCGAACCTATAATAGTCATAAATAAGATTGATGATCAGTCTAAAAATGATAGACAGCATCTACAATGTATTATAG
ATATATACAAAAATATAGGTTATAAGATTTTTTATATATCAGCGAAGAATAATATTGGCATAGATAGTTTACTTGAAGAG
CTAAAAGATAAAACATCAATCTTTATAGGTCAATCAGGAGTTGGTAAATCTGAAACCTTAAGCACCATACTTGGTGAAAA
AATCACTGCCACAACTGAAGTTTCAGATTCAACTAAAAAGGGACGTCATACAACAACTTGCTCAACCTTGTATGAAATTA
ATGGCTCCACAAATATTATTGACTCTCCAGGTATTAGAGAATTTGGACTTTGGCATATCTCACAAGAAGAGCTTTTTGAC
GGCTTCCTAGATTTCAAAAAGTATAAAGGAATGTGCCAATTCAGAAACTGCTCTCATGAAGAAGGATCTAAGGGTTGTGA
AATAGTCAGACAAATAAGCCTTGGTAATATCAATCCTGTTCGTTTTAAGAATTATCATAGAATATTAGCGGAAATTAAAA
ATAATTGA

Upstream 100 bases:

>100_bases
AACAAGTAATTTTTATTCAAATATACTTAATACTATTATTAACAATTTTATAAATAAAGCTTATAATCTAAATTAATAAC
AAATAACATTTTAATAGTTT

Downstream 100 bases:

>100_bases
TGCTCACAAAAATAATTTTTTATCACAACCTAATAAAAGTATTCAACTAACGCTATAAATTTTAAACACAAAGCAAATTT
ATCTTATATAAATGAACGCA

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MQAKVITNFGGNICVKLTTGEKVSALQRSHLKGELTVGDNVELEYTNATYVITKLLDRKNLISRPNQYQRKNKNIAANID
SAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIVINKIDDQSKNDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEE
LKDKTSIFIGQSGVGKSETLSTILGEKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHISQEELFD
GFLDFKKYKGMCQFRNCSHEEGSKGCEIVRQISLGNINPVRFKNYHRILAEIKNN

Sequences:

>Translated_295_residues
MQAKVITNFGGNICVKLTTGEKVSALQRSHLKGELTVGDNVELEYTNATYVITKLLDRKNLISRPNQYQRKNKNIAANID
SAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIVINKIDDQSKNDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEE
LKDKTSIFIGQSGVGKSETLSTILGEKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHISQEELFD
GFLDFKKYKGMCQFRNCSHEEGSKGCEIVRQISLGNINPVRFKNYHRILAEIKNN
>Mature_295_residues
MQAKVITNFGGNICVKLTTGEKVSALQRSHLKGELTVGDNVELEYTNATYVITKLLDRKNLISRPNQYQRKNKNIAANID
SAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIVINKIDDQSKNDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEE
LKDKTSIFIGQSGVGKSETLSTILGEKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHISQEELFD
GFLDFKKYKGMCQFRNCSHEEGSKGCEIVRQISLGNINPVRFKNYHRILAEIKNN

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=296, Percent_Identity=38.8513513513513, Blast_Score=202, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33211; Mature: 33211

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKVITNFGGNICVKLTTGEKVSALQRSHLKGELTVGDNVELEYTNATYVITKLLDRKN
CCCEEEEECCCEEEEEEECCCHHHHHHHHHCCEEEEECCCEEEEECCHHHHHHHHHHHHH
LISRPNQYQRKNKNIAANIDSAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIVINKIDD
HHCCCHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
QSKNDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEELKDKTSIFIGQSGVGKSETL
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHH
STILGEKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHISQEELFD
HHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCHHCEEECCHHHHHH
GFLDFKKYKGMCQFRNCSHEEGSKGCEIVRQISLGNINPVRFKNYHRILAEIKNN
HHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQAKVITNFGGNICVKLTTGEKVSALQRSHLKGELTVGDNVELEYTNATYVITKLLDRKN
CCCEEEEECCCEEEEEEECCCHHHHHHHHHCCEEEEECCCEEEEECCHHHHHHHHHHHHH
LISRPNQYQRKNKNIAANIDSAVIIITHSPAPVEHYIDRYLAALHNSDIEPIIVINKIDD
HHCCCHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
QSKNDRQHLQCIIDIYKNIGYKIFYISAKNNIGIDSLLEELKDKTSIFIGQSGVGKSETL
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCHHHH
STILGEKITATTEVSDSTKKGRHTTTCSTLYEINGSTNIIDSPGIREFGLWHISQEELFD
HHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCHHCEEECCHHHHHH
GFLDFKKYKGMCQFRNCSHEEGSKGCEIVRQISLGNINPVRFKNYHRILAEIKNN
HHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA