| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is mutL [H]
Identifier: 134302436
GI number: 134302436
Start: 1485859
End: 1487661
Strand: Reverse
Name: mutL [H]
Synonym: FTW_1584
Alternate gene names: 134302436
Gene position: 1487661-1485859 (Counterclockwise)
Preceding gene: 134302437
Following gene: 134302429
Centisome position: 78.36
GC content: 34.44
Gene sequence:
>1803_bases ATGCAACCACAACAACATGATTATCGTCAAATAAAAATTCTACCTGAGAGTTTAGCTAACCAGATAGCTGCTGGTGAGGT TATCGAAAGACCATCTTCAGTAGTCAAAGAACTTATTGAAAATGCAATTGATGCCGGAGCAACTCAGATAATAATCGAAA TTCAAGAGGGCGGTAAATCATTAATCAGAATTAGAGATAATGGTAAAGGAATCGCACAACAAGACTTAAAATTAGCTTTG GCACCTCATGCAACAAGTAAGGTCTATACCTTGGATGAACTTGAAGCTGTGGCTAGTATGGGTTTTCGTGGCGAGGCTTT GGCAAGTATAGCTTCTGTTGCTAAACTAAAAATTATCTCAAAGCATCAGAATTCACAAGATGCTTGGCAAATTAATAACC AAACTAGAGAAGTTATGCCAGTAGCACATGTGACAGGAACAACTATAGAGGTTAGTGAGCTTTTCTATAATACTCCTGCA CGCCGTAAGTTTCTTAAAAAAGATAATACGGAGTTTTTACATATTTATGATTTACTCAAAAAGTATATGCTTTGCTATTT TGGTATTGCTTTTAAACTTATTCATAATGGTAAGGAAGTCAAAGATTTACTTATAGCTGAAGAAGTTCAACTTAAATATA ATCGTGTTTTAGATTTATATAGTCGCGAGTTTATTGAAAATGCCATTTATGTAGACAAACAAGTTGGTGATGCCCATCTG TGGGGATGGGTAGCTAGTCCAAGATTTAATCGAGCTCGAGCTGATATGCAGAGTTTCTATATAAATGGACGTATAATTAA AGACAAAATTGTTAGCCATGCGATAAAAAATGCCTATAAAGATGTGATGTATGGCAATCGCTATCCAGCATTTTTACTTT ACCTTGATATTGATTATTGTGAGGTTGATGTAAATGTTCATCCAGCAAAAAGTGAAGTACGTTTTAGAAATCAAAAATTC ATCTATGACTTTCTCTTTGGTAATATCAATAAGGCGATAACTACTAGTGCGGATATAAAAGTATCTAGCCACCAACAAGT AATCAGTCAAGAACGACAAACTAGTAATAATAATCCGCTTAATATTGGTAATATGAGTTTGGATATCAGTATTGATGATG AAAAAGAAGAAAGCTCAAATACAAGCTTATTAGACAAGTACTTTAATAATCAAAATTCTCAAGAAAATGAAATTCGTATT AGCCAACAGTCGAAGTCTAATGGATTAGGACAAGCTATTTGTCAAATTCATGGTATATATATTCTCTCGCAAGTTGAGGA TGGTGTTGTACTTGTAGATATGCATGCAGCACATGAAAGAATACTTTATGAAGAGATGAAAAAAACTTGGCATGCAAATG CTGATAAATTTAAACAAAACCTGTTAATGCCGCTTACATGTCAACTATCTAGCAGTATAGTTGCAGCTGTTGATGAGAAT GTTGAAGTATTTAAAAAGTTGGGTTTTGAAATATCAGTAGTTGCCGATGATGCAATACTTGTACGTTCAACTCCAATATA TGTCAAAGATAAAGACATACAAACCTTAATAACCAACATAGCTACCGAGCTGATATCTTCAAGTAAGACAAAGAGCGTCG AATTTTACTTAAACCATATTTTAGCCACAGTATCTTGTCACGCAGCTGTACGAGCAAATGATAAGTTAAGTATACCAGAG ATGAATCATTTACTTAGACAAATGGAGACAGTAGAGAATTCAGGGCAGTGTAATCATGGGCGACCAACTTGGGTGAAACT TAATTTTGCTCAACTAGATAGTTTCTTTTTGAGAGGAAGGTAA
Upstream 100 bases:
>100_bases GTCTATACTTATGAGGATAAAAACGGTAAGGTTAACAATAAAGAGCTATTTAAAGAATGTGCCACCAGAAACTTTGTAAA AGATCCTTTATAGTGAAAAT
Downstream 100 bases:
>100_bases CCCTCTATAAAATATTGTCATCCGATACTTGAATAGTAATCTGTTTGCTAGTTGATAAACTTTCAACTTGCTTATAAATA TACTTAGTGTAGAATCACCT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MQPQQHDYRQIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGKGIAQQDLKLAL APHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAWQINNQTREVMPVAHVTGTTIEVSELFYNTPA RRKFLKKDNTEFLHIYDLLKKYMLCYFGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHL WGWVASPRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYCEVDVNVHPAKSEVRFRNQKF IYDFLFGNINKAITTSADIKVSSHQQVISQERQTSNNNPLNIGNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRI SQQSKSNGLGQAICQIHGIYILSQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDEN VEVFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHILATVSCHAAVRANDKLSIPE MNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLRGR
Sequences:
>Translated_600_residues MQPQQHDYRQIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGKGIAQQDLKLAL APHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAWQINNQTREVMPVAHVTGTTIEVSELFYNTPA RRKFLKKDNTEFLHIYDLLKKYMLCYFGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHL WGWVASPRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYCEVDVNVHPAKSEVRFRNQKF IYDFLFGNINKAITTSADIKVSSHQQVISQERQTSNNNPLNIGNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRI SQQSKSNGLGQAICQIHGIYILSQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDEN VEVFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHILATVSCHAAVRANDKLSIPE MNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLRGR >Mature_600_residues MQPQQHDYRQIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGKGIAQQDLKLAL APHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAWQINNQTREVMPVAHVTGTTIEVSELFYNTPA RRKFLKKDNTEFLHIYDLLKKYMLCYFGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHL WGWVASPRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYCEVDVNVHPAKSEVRFRNQKF IYDFLFGNINKAITTSADIKVSSHQQVISQERQTSNNNPLNIGNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRI SQQSKSNGLGQAICQIHGIYILSQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDEN VEVFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHILATVSCHAAVRANDKLSIPE MNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLRGR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=320, Percent_Identity=34.6875, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI189458898, Length=326, Percent_Identity=29.1411042944785, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI4505911, Length=326, Percent_Identity=29.1411042944785, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI310128478, Length=346, Percent_Identity=26.0115606936416, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI4505913, Length=346, Percent_Identity=26.0115606936416, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI189458896, Length=319, Percent_Identity=28.8401253918495, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI263191589, Length=231, Percent_Identity=30.3030303030303, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI310128480, Length=297, Percent_Identity=23.9057239057239, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI91992162, Length=355, Percent_Identity=24.5070422535211, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI91992160, Length=355, Percent_Identity=24.5070422535211, Blast_Score=86, Evalue=9e-17, Organism=Escherichia coli, GI1790612, Length=544, Percent_Identity=36.3970588235294, Blast_Score=343, Evalue=2e-95, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.0625, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17562796, Length=416, Percent_Identity=25.9615384615385, Blast_Score=119, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=345, Percent_Identity=33.6231884057971, Blast_Score=179, Evalue=9e-46, Organism=Saccharomyces cerevisiae, GI6324247, Length=342, Percent_Identity=27.1929824561404, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6325093, Length=154, Percent_Identity=29.8701298701299, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6323063, Length=342, Percent_Identity=23.0994152046784, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17136968, Length=323, Percent_Identity=31.2693498452012, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI17136970, Length=359, Percent_Identity=25.9052924791086, Blast_Score=115, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 68045; Mature: 68045
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPQQHDYRQIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKS CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCCE LIRIRDNGKGIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIIS EEEEECCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KHQNSQDAWQINNQTREVMPVAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLK HCCCCCCCEEECCCCHHEEEEEEECCCEEEEHHHHHCCHHHHHHHHCCCCCEEHHHHHHH KYMLCYFGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE WGWVASPRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYC EEEECCCCCHHHHHHHHHHEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE EVDVNVHPAKSEVRFRNQKFIYDFLFGNINKAITTSADIKVSSHQQVISQERQTSNNNPL EEEEEECCCHHHHHHCCCCEEEEHHHCCCCHHEECCCCEEECHHHHHHHHHHHCCCCCCE NIGNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIY EECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHEE ILSQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDEN EEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHCCC VEVFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHI HHHHHHCCCEEEEEECCEEEEECCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LATVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLRGR HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure MQPQQHDYRQIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKS CCCCCCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCCE LIRIRDNGKGIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIIS EEEEECCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KHQNSQDAWQINNQTREVMPVAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLK HCCCCCCCEEECCCCHHEEEEEEECCCEEEEHHHHHCCHHHHHHHHCCCCCEEHHHHHHH KYMLCYFGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEE WGWVASPRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYC EEEECCCCCHHHHHHHHHHEECCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE EVDVNVHPAKSEVRFRNQKFIYDFLFGNINKAITTSADIKVSSHQQVISQERQTSNNNPL EEEEEECCCHHHHHHCCCCEEEEHHHCCCCHHEECCCCEEECHHHHHHHHHHHCCCCCCE NIGNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIY EECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHEE ILSQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDEN EEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHCCC VEVFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHI HHHHHHCCCEEEEEECCEEEEECCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LATVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLRGR HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA