| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is 134302428
Identifier: 134302428
GI number: 134302428
Start: 1472111
End: 1473328
Strand: Reverse
Name: 134302428
Synonym: FTW_1566
Alternate gene names: NA
Gene position: 1473328-1472111 (Counterclockwise)
Preceding gene: 134302429
Following gene: 134302423
Centisome position: 77.61
GC content: 30.46
Gene sequence:
>1218_bases ATGTTTAAAACTACAGTTAAAAAAGTATTAATAGTTAATCCAGGACCATCTGCAGAATATACTATAACTGAGTTATTTAA AAATGATGTTGAGATATTTGTCATAATAACTCTAGATCCTATTGTTATTTTAAAGCTCATAGAAAAAGTTTTAACCAAAA TAAAGAACGTTATATCAAGTGAAGATAATTTTGATATCAGTTATCTTGAGTCATTAAGTTTTGACTACATTATATGTGGG CAAGAAGACTCTATAGTAATATACGATAGACTTATGAATAAATTACTTACGCAATATGCAAATAGTCTTAATACTAGCTT AGTTAGAAAAGATAAATATCTTACCCATGAGGTTTTGAAAGCCAAAGGTTTGAATTATATAAAGCAAAAACAAATTAGTT GTGATGACTATGCTGAAGTAGAGATCGATTATCCTTGTTTTATAAAGCCCTTAGATGGTAGTGCAAGTATAGGTGCCCAA CGCTTAAACTCTGATATCGACAAAGAGAATTATATGCAACAGCGCCTAGTATCACCAATGTCGAGAGTTTATGATAAGTT TATTATTTCTGAGTTGATTCAGGGTAAAGAATATTTTGTAGATGCTTTTTCTATTAATGGAAAACATTATATATCTTCAA TTCAGAAGTATGATAAGCTAATCTTTAAAGGTACGCCGATTCCCATATCATCAGAACTTGAAAAAGATCCAGCTATTCTA GATATAATCACTCAATACATAGAGCCAGTCCTTACAGCACTAGGTTTAGAAAATGGTTTCTCTCATAGTGAGCTTTTTCT TACGGCAGATAATAAACCGGTATTAATAGAGTTAAATCCTAGAGTGTCTGGAGCAACTGGGGCTGCAAATATTACCGCTG CATTCGCTGGTAATAATACCCAATTAGATATATTTGCCGAGAAGATCTTAGCTAGAAATATACCACAAAGGCAAGCAATG TTTGCAAAAACACTGTGTTTGTATAATTTTACTAACAATCCATTAATTGATCTTAACACTTTAAAATCTACGTTTTCATC TATAAAAGTAGTTAATCAGCTAAAGCCTATTGGTTATGTTAGGAATCATGACTCAAATTTATCAATAATTGATATTGTTG CCTTTATGGTATTACAAAATGATAATTTTGAAAAGCTAGAAAAAGATGCTCAACAAATACTTAAATGCGATATAGAAACA GGTTATACAATTGTATAA
Upstream 100 bases:
>100_bases TAAAGTTAAATATATTTAACAATTGCTATCTTTGCTAAATGATAAGCTTTTGATATGATGATTTCACTGAAATGTGTAGT TAAGTAAAGGTATAAAATAT
Downstream 100 bases:
>100_bases ATTTATTTAAATACAAGTAATATACCCTAAGTTTTAATTTAAATTGCTTGCTTTAATATGTTTAAGAAGAGTTAGATTTA GGCAAAATTTTTTGTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MFKTTVKKVLIVNPGPSAEYTITELFKNDVEIFVIITLDPIVILKLIEKVLTKIKNVISSEDNFDISYLESLSFDYIICG QEDSIVIYDRLMNKLLTQYANSLNTSLVRKDKYLTHEVLKAKGLNYIKQKQISCDDYAEVEIDYPCFIKPLDGSASIGAQ RLNSDIDKENYMQQRLVSPMSRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPAIL DIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNTQLDIFAEKILARNIPQRQAM FAKTLCLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGYVRNHDSNLSIIDIVAFMVLQNDNFEKLEKDAQQILKCDIET GYTIV
Sequences:
>Translated_405_residues MFKTTVKKVLIVNPGPSAEYTITELFKNDVEIFVIITLDPIVILKLIEKVLTKIKNVISSEDNFDISYLESLSFDYIICG QEDSIVIYDRLMNKLLTQYANSLNTSLVRKDKYLTHEVLKAKGLNYIKQKQISCDDYAEVEIDYPCFIKPLDGSASIGAQ RLNSDIDKENYMQQRLVSPMSRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPAIL DIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNTQLDIFAEKILARNIPQRQAM FAKTLCLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGYVRNHDSNLSIIDIVAFMVLQNDNFEKLEKDAQQILKCDIET GYTIV >Mature_405_residues MFKTTVKKVLIVNPGPSAEYTITELFKNDVEIFVIITLDPIVILKLIEKVLTKIKNVISSEDNFDISYLESLSFDYIICG QEDSIVIYDRLMNKLLTQYANSLNTSLVRKDKYLTHEVLKAKGLNYIKQKQISCDDYAEVEIDYPCFIKPLDGSASIGAQ RLNSDIDKENYMQQRLVSPMSRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPAIL DIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNTQLDIFAEKILARNIPQRQAM FAKTLCLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGYVRNHDSNLSIIDIVAFMVLQNDNFEKLEKDAQQILKCDIET GYTIV
Specific function: Unknown
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45764; Mature: 45764
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKTTVKKVLIVNPGPSAEYTITELFKNDVEIFVIITLDPIVILKLIEKVLTKIKNVISS CCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCC EDNFDISYLESLSFDYIICGQEDSIVIYDRLMNKLLTQYANSLNTSLVRKDKYLTHEVLK CCCCCHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKGLNYIKQKQISCDDYAEVEIDYPCFIKPLDGSASIGAQRLNSDIDKENYMQQRLVSPM HCCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHH SRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPAIL HHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH DIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNT HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCC QLDIFAEKILARNIPQRQAMFAKTLCLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGYV EEHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCEE RNHDSNLSIIDIVAFMVLQNDNFEKLEKDAQQILKCDIETGYTIV ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEC >Mature Secondary Structure MFKTTVKKVLIVNPGPSAEYTITELFKNDVEIFVIITLDPIVILKLIEKVLTKIKNVISS CCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCC EDNFDISYLESLSFDYIICGQEDSIVIYDRLMNKLLTQYANSLNTSLVRKDKYLTHEVLK CCCCCHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKGLNYIKQKQISCDDYAEVEIDYPCFIKPLDGSASIGAQRLNSDIDKENYMQQRLVSPM HCCCCHHHHHCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHH SRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPAIL HHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH DIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNT HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCC QLDIFAEKILARNIPQRQAMFAKTLCLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGYV EEHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCEE RNHDSNLSIIDIVAFMVLQNDNFEKLEKDAQQILKCDIETGYTIV ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA