| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is lptG [H]
Identifier: 134302362
GI number: 134302362
Start: 1390199
End: 1391254
Strand: Direct
Name: lptG [H]
Synonym: FTW_1486
Alternate gene names: 134302362
Gene position: 1390199-1391254 (Clockwise)
Preceding gene: 134302361
Following gene: 134302363
Centisome position: 73.23
GC content: 31.44
Gene sequence:
>1056_bases TTGAATCGTATCGATCGTTATATTTTTAGGACCGTATTTAGCAGCTTTCTAATAGTTAGTATAATTTTCTGTATTTTATT TTTTATCTTTACATACTTAGCTCAAGTAAGTAACAATACTGCGAATGTAAGTAATTTTGAACTTATTATCAATACATTAA TTCAACTTCCAGGTATCTTATATACACTACTACCGGCATGTGCGATGGTTGGTGCTCTTATGGGTTTAAGTTTACTTGCA AATAATTCAGAGATAATTGTACTTAGATCTTTTGGTCGTTCTACAGCTCAAATCGCTAAAGGTGTAATTTTAGTTGGTCT AATAGGCTCTGTAACAACTATGGTTTTTGGTGGCTACATAGCCCCAATTTTACAACGCCAAGTAGATACTAATATGGTCA CATACAATACTCATGATCTATGGTTTAAAACTCCTGATGGCTTTATGAATATTGCTAATATAGAACCTACTAATGGCAAA GCTTATGGGATCAGAAAGTTTATGGTGCAAGATAATAAGGTTAGAGAAATCCGTTACGCAGAAAGTGCAACTTATATTAA CGATGCTTCAGCTAATGTTTTTAATATAAGAAAAATTATTTTTCCTGCTAGTGATGGTCAAAAACATATTGATATAGTCA CAAATATGACTAACGCTGTATGGTCAAATCCATTACCTATTTCAGTAGCCAAAGTCATTACCATAAATGATAATAATTAT TTAAATTTCTCTCAACTTACCAGCTATATGCTTTCAAATAGTCAAGCTAAAGATTCGATATCTTTAAAATTTTGGCAAGA AGTTTTCCAGCCATTATCTTTGATGATACTAATTCTACTTGCCGTGCCTCTTAGTATTGGTTCAACGAGATCATCAACAC TTATACTTAAGCTTTTACTTGGAGCTTTTTTTGGTTTTGCATTTTTTATAATAAACCAAATATTTGGTCCTATTGCACTA ATTTTACACTTACCACCAATACTTGGTGCTGCAGGGCCAACTGTTATAGCGCTAATATTGTTAATATATTTATTTATAAA ATCAAAAGAAACATAA
Upstream 100 bases:
>100_bases TATGGATAGGTTTTTGGTTGCCTCATATCTTTTTTACAATTTTTGCTGTTAGAACAATTAGAAAAGATAATGGATCTTCT AAGAGGGAAAAATAATGCTA
Downstream 100 bases:
>100_bases AAATAATATGAGTATCGAAAAATATTCCCTAAATAATAATTTAGATATCTATATAAAAAAAGATATACGAGCACCTGTGG TTTTGGCACAAATATGGTAT
Product: YjgP/YjgQ permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIINTLIQLPGILYTLLPACAMVGALMGLSLLA NNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGK AYGIRKFMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISVAKVITINDNNY LNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLLGAFFGFAFFIINQIFGPIAL ILHLPPILGAAGPTVIALILLIYLFIKSKET
Sequences:
>Translated_351_residues MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIINTLIQLPGILYTLLPACAMVGALMGLSLLA NNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGK AYGIRKFMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISVAKVITINDNNY LNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLLGAFFGFAFFIINQIFGPIAL ILHLPPILGAAGPTVIALILLIYLFIKSKET >Mature_351_residues MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIINTLIQLPGILYTLLPACAMVGALMGLSLLA NNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYIAPILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGK AYGIRKFMVQDNKVREIRYAESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISVAKVITINDNNY LNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLLGAFFGFAFFIINQIFGPIAL ILHLPPILGAAGPTVIALILLIYLFIKSKET
Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lptF/lptG family [H]
Homologues:
Organism=Escherichia coli, GI87082400, Length=361, Percent_Identity=25.4847645429363, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005495 [H]
Pfam domain/function: PF03739 YjgP_YjgQ [H]
EC number: NA
Molecular weight: Translated: 38931; Mature: 38931
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIINTLIQLPGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYI HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRYA HHHHHHHHCCCEEEEECCEEEEECCCCCEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHH ESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISVAKVITINDNNY HCCCEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCE LNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLL ECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSKET HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNRIDRYIFRTVFSSFLIVSIIFCILFFIFTYLAQVSNNTANVSNFELIINTLIQLPGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YTLLPACAMVGALMGLSLLANNSEIIVLRSFGRSTAQIAKGVILVGLIGSVTTMVFGGYI HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APILQRQVDTNMVTYNTHDLWFKTPDGFMNIANIEPTNGKAYGIRKFMVQDNKVREIRYA HHHHHHHHCCCEEEEECCEEEEECCCCCEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHH ESATYINDASANVFNIRKIIFPASDGQKHIDIVTNMTNAVWSNPLPISVAKVITINDNNY HCCCEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCE LNFSQLTSYMLSNSQAKDSISLKFWQEVFQPLSLMILILLAVPLSIGSTRSSTLILKLLL ECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GAFFGFAFFIINQIFGPIALILHLPPILGAAGPTVIALILLIYLFIKSKET HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]