| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
Click here to switch to the map view.
The map label for this gene is 134302299
Identifier: 134302299
GI number: 134302299
Start: 1308195
End: 1308683
Strand: Direct
Name: 134302299
Synonym: FTW_1397
Alternate gene names: NA
Gene position: 1308195-1308683 (Clockwise)
Preceding gene: 134302298
Following gene: 134302305
Centisome position: 68.91
GC content: 25.36
Gene sequence:
>489_bases ATGTCCAAGAACGCTTTAGTTATTATTGATGTGCAAAATTATTTTGTAAATGAGCATACCAAAACATTACCTCAAAAAAT TAGAAAACTTATACAAACTAATGACTTTAACTATATTATTTTTAGCAAATATATAAATAACTTAAAAAGTAACCATTACA ATATATTCAAATGGGAGGAATGCCAAAACTCTCCTGATATCGACATTCATCCGGAACTTTTAGAATTTACAAATAGTAAA AATGTTTTTGAAAAAAATACTTATTCGATATTTAAATCTACGATGCTAAATTTTTTAAAACAAAAAAATATTAATAAAAT CTATCTAACTGGTATAGATATTGATGCCTGTGTTTTAGCTTCAGCATTTGATGGTTTTGACTTAGGTTATGATATTGAAA TTTTGCAAGATTTTTGTCTAAGTCATTTTGGTGAAGAATTTAAACACTCTGCTCTTAAAATTATGCATAAGAACTTAATT TGCCAGTAA
Upstream 100 bases:
>100_bases TGTCTACTTTACACTAAGAAAATGGCAAATAACCTTAAAAAGACAGCAAAATACCAACGTTGATAACATTATAATGCTCA ACGGATGAGAGAATAATAAG
Downstream 100 bases:
>100_bases AATTTAATCTACTCTTTCAAAAAAATTTAGATTAAGTATTATAAGTTAGCACTCGTCCCACCTATGCCTCTCGGTTGATT ATTTTGAAAACCTCCTTGAG
Product: isochorismatase hydrolase family protein
Products: NA
Alternate protein names: Isochorismatase Family Protein; Isochorismatase Hydrolase Family Protein; Hydrolase
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSKNALVIIDVQNYFVNEHTKTLPQKIRKLIQTNDFNYIIFSKYINNLKSNHYNIFKWEECQNSPDIDIHPELLEFTNSK NVFEKNTYSIFKSTMLNFLKQKNINKIYLTGIDIDACVLASAFDGFDLGYDIEILQDFCLSHFGEEFKHSALKIMHKNLI CQ
Sequences:
>Translated_162_residues MSKNALVIIDVQNYFVNEHTKTLPQKIRKLIQTNDFNYIIFSKYINNLKSNHYNIFKWEECQNSPDIDIHPELLEFTNSK NVFEKNTYSIFKSTMLNFLKQKNINKIYLTGIDIDACVLASAFDGFDLGYDIEILQDFCLSHFGEEFKHSALKIMHKNLI CQ >Mature_161_residues SKNALVIIDVQNYFVNEHTKTLPQKIRKLIQTNDFNYIIFSKYINNLKSNHYNIFKWEECQNSPDIDIHPELLEFTNSKN VFEKNTYSIFKSTMLNFLKQKNINKIYLTGIDIDACVLASAFDGFDLGYDIEILQDFCLSHFGEEFKHSALKIMHKNLIC Q
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19042; Mature: 18911
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNALVIIDVQNYFVNEHTKTLPQKIRKLIQTNDFNYIIFSKYINNLKSNHYNIFKWEE CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCEEEEHH CQNSPDIDIHPELLEFTNSKNVFEKNTYSIFKSTMLNFLKQKNINKIYLTGIDIDACVLA HCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH SAFDGFDLGYDIEILQDFCLSHFGEEFKHSALKIMHKNLICQ HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKNALVIIDVQNYFVNEHTKTLPQKIRKLIQTNDFNYIIFSKYINNLKSNHYNIFKWEE CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCEEEEHH CQNSPDIDIHPELLEFTNSKNVFEKNTYSIFKSTMLNFLKQKNINKIYLTGIDIDACVLA HCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH SAFDGFDLGYDIEILQDFCLSHFGEEFKHSALKIMHKNLICQ HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA