| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is yceA [C]
Identifier: 134302293
GI number: 134302293
Start: 1301609
End: 1302607
Strand: Direct
Name: yceA [C]
Synonym: FTW_1391
Alternate gene names: 134302293
Gene position: 1301609-1302607 (Clockwise)
Preceding gene: 134302290
Following gene: 134302297
Centisome position: 68.56
GC content: 33.83
Gene sequence:
>999_bases TTGGGAATATATATGTCACAAATAGTTGTCTGCGCAATGTATAAATTTGTTACATTAGAAGATTTTGAAGCCATGCGTCA ACCTCTTCTAGATACTATGATAAAAAACAATGTCAAAGGTACACTACTTTTAGCTAATGAAGGAATCAATGGTACTGTTG CAGGAACGCGTGAAAGTATAGATAACCTACTAGCTTACTTAAAAGCAGATCCACGTCTAGTAGATATTGATTATAAAGAG TCATATCATCAAGAAATGCCCTTTTACCGTTCAAAAGTAAAGCTTAAAAAAGAGATTGTTACTCTTGGTATTGATGAAAT TGACCCTAATAAAATTTGTGGTAAATATGTTGAGCCAAAAGATTGGAATGACTTGATCTCTGATCCTGAAACTGTACTTA TTGATACTCGTAATGAATATGAAATAGAAATTGGTACTTTTAAAAACGCTATTAACCCGCACACTGAAAATTTTCGCGAA TTCCCTCAATATGTCGATGAGAATCTCGATCCTAAAAAACATAAAAAAGTAGCTATGTTTTGTACTGGTGGAATTAGATG TGAAAAATCCACAGCTCTGCTTAAAGCCAAAGGTTTTGATGAAGTTTATCATCTAAAAGGAGGTATTCTTAAGTATCTAG AAGAAGTACCAAAAGAAAAATCTATGTGGCAAGGTGAGTGCTTTGTATTTGATTCAAGAGTTGCGGTAAATCACGATCTT GAAAAAGGCAACTATGATCAATGTTTTGCTTGTCGCATGCCAATTACAGAAGATGATAAAAAACGTCCTGAATATGTCAA AGGAATAAGCTGTCATCATTGTTATGATAAAGTTACTGAAAAACAAAAAGCTCGTTTTGCTGAGCGTGAAAAGCAATCAC AATTAGCTGCTGAAAAAGGTTTCTCTCATGTTGGTGATGAGGCAAAAAAACTTGCACAACTAAATAAACAAAAAAAGCAG CAAGCTAAAGAAGCAGCTCGTAAAAAAGCTCAACAATAG
Upstream 100 bases:
>100_bases AAGATTAAATCGAATTATTGTCCTGAGGATTTTGGCAAAAGCATTTCAATATTTGTGGCATAATGTATAATATGATGTCT TTAATTAATAACTAACTTGT
Downstream 100 bases:
>100_bases ATATAAATCGTCAACCTAAAAATTAACTTTATCTTTGTGCTTGATACAGACATTTTTATACTGATTAAGAAATCACTGCT TTCGTTGAAATAACGATATA
Product: rhodanese-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MGIYMSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLLAYLKADPRLVDIDYKE SYHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFRE FPQYVDENLDPKKHKKVAMFCTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDL EKGNYDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHVGDEAKKLAQLNKQKKQ QAKEAARKKAQQ
Sequences:
>Translated_332_residues MGIYMSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLLAYLKADPRLVDIDYKE SYHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFRE FPQYVDENLDPKKHKKVAMFCTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDL EKGNYDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHVGDEAKKLAQLNKQKKQ QAKEAARKKAQQ >Mature_331_residues GIYMSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESIDNLLAYLKADPRLVDIDYKES YHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPKDWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREF PQYVDENLDPKKHKKVAMFCTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDLE KGNYDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKGFSHVGDEAKKLAQLNKQKKQQ AKEAARKKAQQ
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=221, Percent_Identity=38.4615384615385, Blast_Score=137, Evalue=1e-32, Organism=Escherichia coli, GI1787294, Length=232, Percent_Identity=34.9137931034483, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1085_FRAT1 (Q14HD0)
Other databases:
- EMBL: AM286280 - RefSeq: YP_667196.1 - ProteinModelPortal: Q14HD0 - STRING: Q14HD0 - GeneID: 4199576 - GenomeReviews: AM286280_GR - KEGG: ftf:FTF1085 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: QVYHLKG - PhylomeDB: Q14HD0 - ProtClustDB: CLSK986343 - BioCyc: FTUL393115:FTF1085-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 38226; Mature: 38095
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 181-181
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYMSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH DNLLAYLKADPRLVDIDYKESYHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPK HHHHHHHCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC DWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQYVDENLDPKKHKKVAMF CCHHHHCCCCEEEEECCCCEEEEEECHHCCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEE CTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDL ECCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCEEECCCC EKGNYDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKG CCCCCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FSHVGDEAKKLAQLNKQKKQQAKEAARKKAQQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIYMSQIVVCAMYKFVTLEDFEAMRQPLLDTMIKNNVKGTLLLANEGINGTVAGTRESI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH DNLLAYLKADPRLVDIDYKESYHQEMPFYRSKVKLKKEIVTLGIDEIDPNKICGKYVEPK HHHHHHHCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCC DWNDLISDPETVLIDTRNEYEIEIGTFKNAINPHTENFREFPQYVDENLDPKKHKKVAMF CCHHHHCCCCEEEEECCCCEEEEEECHHCCCCCCHHHHHHHHHHHCCCCCCHHHCEEEEE CTGGIRCEKSTALLKAKGFDEVYHLKGGILKYLEEVPKEKSMWQGECFVFDSRVAVNHDL ECCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEECCEEECCCC EKGNYDQCFACRMPITEDDKKRPEYVKGISCHHCYDKVTEKQKARFAEREKQSQLAAEKG CCCCCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FSHVGDEAKKLAQLNKQKKQQAKEAARKKAQQ HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA