Click here to switch to the map view.

The map label for this gene is yjhB [H]

Identifier: 134302275

GI number: 134302275

Start: 1280397

End: 1281002

Strand: Reverse

Name: yjhB [H]

Synonym: FTW_1363

Alternate gene names: 134302275

Gene position: 1281002-1280397 (Counterclockwise)

Preceding gene: 134302277

Following gene: 134302274

Centisome position: 67.48

GC content: 30.03

Gene sequence:

>606_bases
ATGCATAAAGATAAAATATTTGAGTTTATAAAAAAAGTTCAAGCTATATCTCATACTGGAATAGTCTATTCTAAATGCCC
ATATGCTTTAGATAATTACCATGAGCTATTAGAGTTAAGCTCAAAAATGCTACATGAATATATCAAGTCAGATGTCCAGC
CATATGATATCTATAGAGATATGTATTATCCTACACCGCAACCTGGAGTGCGCGTGGTTATATTTAAAGATGATAAACTT
ATGATGACTGAAGATGCTGATACACCTAATGAATGGACTATCCCAGGTGGTTGGTGTGATATTGATCTTTCACCTGTTGA
AACATGTATCAAGGAAGTCAAAGAAGAAACAGGTTATGATATCAAGGTAGTTAAATTTTTGGCTTTGATGGATAGAAATA
AATATACACAAAGTGAGATATATAATGTTTATAGCTTGGTGTTTCTAGCACAAATTATTGGTGGTGAAAATAATCCAAAT
TTTGAAGTTAAAAAAGTAGATTTTTTTGAAATTGATAAGTTGCCAAAGTTATCACATAAGCTTACAAAAACGGAACTTAA
TATTATTCTAGAAGCATATAAGCAAGATATTATATATTTTGAATAA

Upstream 100 bases:

>100_bases
TTATATTTTCTTATAAATTATATCGAGGCTAAGTTTAATCATTAATCTTGAAATATATATGTGGTATATTTTATTTTATT
TGCTTGGAAAAGATAAATTA

Downstream 100 bases:

>100_bases
TAGTGAGGATATAAAATATGATAAAAGTATTTGGAATAAATAATTGTACAAGCGTTAGAAATACTCTTAAGTTCTTTGAA
GAAAAGGATAAAAAAGTCGA

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MHKDKIFEFIKKVQAISHTGIVYSKCPYALDNYHELLELSSKMLHEYIKSDVQPYDIYRDMYYPTPQPGVRVVIFKDDKL
MMTEDADTPNEWTIPGGWCDIDLSPVETCIKEVKEETGYDIKVVKFLALMDRNKYTQSEIYNVYSLVFLAQIIGGENNPN
FEVKKVDFFEIDKLPKLSHKLTKTELNIILEAYKQDIIYFE

Sequences:

>Translated_201_residues
MHKDKIFEFIKKVQAISHTGIVYSKCPYALDNYHELLELSSKMLHEYIKSDVQPYDIYRDMYYPTPQPGVRVVIFKDDKL
MMTEDADTPNEWTIPGGWCDIDLSPVETCIKEVKEETGYDIKVVKFLALMDRNKYTQSEIYNVYSLVFLAQIIGGENNPN
FEVKKVDFFEIDKLPKLSHKLTKTELNIILEAYKQDIIYFE
>Mature_201_residues
MHKDKIFEFIKKVQAISHTGIVYSKCPYALDNYHELLELSSKMLHEYIKSDVQPYDIYRDMYYPTPQPGVRVVIFKDDKL
MMTEDADTPNEWTIPGGWCDIDLSPVETCIKEVKEETGYDIKVVKFLALMDRNKYTQSEIYNVYSLVFLAQIIGGENNPN
FEVKKVDFFEIDKLPKLSHKLTKTELNIILEAYKQDIIYFE

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23600; Mature: 23600

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKDKIFEFIKKVQAISHTGIVYSKCPYALDNYHELLELSSKMLHEYIKSDVQPYDIYRD
CCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MYYPTPQPGVRVVIFKDDKLMMTEDADTPNEWTIPGGWCDIDLSPVETCIKEVKEETGYD
CCCCCCCCCEEEEEEECCEEEEECCCCCCCCEECCCCEEECCCCHHHHHHHHHHHHCCCC
IKVVKFLALMDRNKYTQSEIYNVYSLVFLAQIIGGENNPNFEVKKVDFFEIDKLPKLSHK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCHHHHH
LTKTELNIILEAYKQDIIYFE
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHKDKIFEFIKKVQAISHTGIVYSKCPYALDNYHELLELSSKMLHEYIKSDVQPYDIYRD
CCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MYYPTPQPGVRVVIFKDDKLMMTEDADTPNEWTIPGGWCDIDLSPVETCIKEVKEETGYD
CCCCCCCCCEEEEEEECCEEEEECCCCCCCCEECCCCEEECCCCHHHHHHHHHHHHCCCC
IKVVKFLALMDRNKYTQSEIYNVYSLVFLAQIIGGENNPNFEVKKVDFFEIDKLPKLSHK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCHHHHH
LTKTELNIILEAYKQDIIYFE
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]