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The map label for this gene is yeiE [H]

Identifier: 134302240

GI number: 134302240

Start: 1246616

End: 1247512

Strand: Direct

Name: yeiE [H]

Synonym: FTW_1320

Alternate gene names: 134302240

Gene position: 1246616-1247512 (Clockwise)

Preceding gene: 134302238

Following gene: 134302241

Centisome position: 65.66

GC content: 30.55

Gene sequence:

>897_bases
ATGCGTATCACTCTAAAACAGCTTCAAGTGTTTGTAAATACTGCAAAATCAGAATCGATTAGTGCAGGTGCTGAAAAATG
TTTCATCTCTCAGGCTGCGGCTAGTATGTCGTTATCACAGCTTGAAAATATGCTTGATACTACACTGTTTGATAGAGTTG
GCAAACGCATGAAGTTAAACGCAAATGGTAAAAACCTCTTAGCTAAAGCTATTAAGATTTTAGATGAAATAGAAGAATTT
GAAACATTTAGTGTAAAAAACACTCTACTATCTGGAAAAATAGTTATTGGTGCAAGTACTACAATAGCGAACTATGTTTT
GCCTAAATATGTAGCAATCTTTAAAAAACTACATCCAGATACTGATTTTGAAATTATCAATAATGTTGAATCATTAAACT
GTGATGTAGGTTTTATAGAAGGTGAGTGTAATAGCCAAGTAATAGCTACTAGTTTATGGGCAAAAGATAAACTAAAAATA
ATTTGTCGCGTTAATCATACATTAACTACCCAAAATAATTTAAAAATAAAAGATTTACTAGAATACGAATGGGCTACAAG
AGAACAAGGTTCTGGCACTTTTGAAATATTTTTTAATGCTTTGGAAGATAAAGTTTCTAGTATCAAAAAAGCAATAACCC
TACGCAGCTCAGAAGCGATAAAACAGTATGTAGCCTATAGTGACTGTTTAGCATGCATATCTGAAGTGATTACAACTCAA
GCATTAGATACAACTAAATATAGTATTCTTGAAACTAAAGATCTTGATTTAAGCAGGAATTTTTACAAATTATTGCATAA
AAAGAAATATCATACTGCTCTAACACAAGCATTTTGTGATTTTATAGAGAAAGATATAAATGGTTGTGATATAAGGCTTG
AAAATTTTAGTATTTAA

Upstream 100 bases:

>100_bases
CCAAGAATTTGATAAGTGTTTAAATAAATATTAGTAATATTGAATATCAGAAAATCTTATAATAGAACCACATGATATAA
GCTTTACTAAAACATAAATA

Downstream 100 bases:

>100_bases
CGTCATCTTTATACACAGACGGTTAAATCTAAATCTAAGGAGATAAAATGTCTATAGGGATAATTCTACTCATAATAGTA
GTTGTAATAGCGGTATATGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRITLKQLQVFVNTAKSESISAGAEKCFISQAAASMSLSQLENMLDTTLFDRVGKRMKLNANGKNLLAKAIKILDEIEEF
ETFSVKNTLLSGKIVIGASTTIANYVLPKYVAIFKKLHPDTDFEIINNVESLNCDVGFIEGECNSQVIATSLWAKDKLKI
ICRVNHTLTTQNNLKIKDLLEYEWATREQGSGTFEIFFNALEDKVSSIKKAITLRSSEAIKQYVAYSDCLACISEVITTQ
ALDTTKYSILETKDLDLSRNFYKLLHKKKYHTALTQAFCDFIEKDINGCDIRLENFSI

Sequences:

>Translated_298_residues
MRITLKQLQVFVNTAKSESISAGAEKCFISQAAASMSLSQLENMLDTTLFDRVGKRMKLNANGKNLLAKAIKILDEIEEF
ETFSVKNTLLSGKIVIGASTTIANYVLPKYVAIFKKLHPDTDFEIINNVESLNCDVGFIEGECNSQVIATSLWAKDKLKI
ICRVNHTLTTQNNLKIKDLLEYEWATREQGSGTFEIFFNALEDKVSSIKKAITLRSSEAIKQYVAYSDCLACISEVITTQ
ALDTTKYSILETKDLDLSRNFYKLLHKKKYHTALTQAFCDFIEKDINGCDIRLENFSI
>Mature_298_residues
MRITLKQLQVFVNTAKSESISAGAEKCFISQAAASMSLSQLENMLDTTLFDRVGKRMKLNANGKNLLAKAIKILDEIEEF
ETFSVKNTLLSGKIVIGASTTIANYVLPKYVAIFKKLHPDTDFEIINNVESLNCDVGFIEGECNSQVIATSLWAKDKLKI
ICRVNHTLTTQNNLKIKDLLEYEWATREQGSGTFEIFFNALEDKVSSIKKAITLRSSEAIKQYVAYSDCLACISEVITTQ
ALDTTKYSILETKDLDLSRNFYKLLHKKKYHTALTQAFCDFIEKDINGCDIRLENFSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=31.4878892733564, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1787601, Length=286, Percent_Identity=23.4265734265734, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081904, Length=203, Percent_Identity=26.1083743842365, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788296, Length=246, Percent_Identity=23.5772357723577, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI145693105, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788748, Length=124, Percent_Identity=33.8709677419355, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33562; Mature: 33562

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLKQLQVFVNTAKSESISAGAEKCFISQAAASMSLSQLENMLDTTLFDRVGKRMKLN
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
ANGKNLLAKAIKILDEIEEFETFSVKNTLLSGKIVIGASTTIANYVLPKYVAIFKKLHPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEEECCHHHHHHHHHHHHHHHHHHCCC
TDFEIINNVESLNCDVGFIEGECNSQVIATSLWAKDKLKIICRVNHTLTTQNNLKIKDLL
CCHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHCCCCEEEEEEECCEEECCCCCCHHHHH
EYEWATREQGSGTFEIFFNALEDKVSSIKKAITLRSSEAIKQYVAYSDCLACISEVITTQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ALDTTKYSILETKDLDLSRNFYKLLHKKKYHTALTQAFCDFIEKDINGCDIRLENFSI
HHCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MRITLKQLQVFVNTAKSESISAGAEKCFISQAAASMSLSQLENMLDTTLFDRVGKRMKLN
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
ANGKNLLAKAIKILDEIEEFETFSVKNTLLSGKIVIGASTTIANYVLPKYVAIFKKLHPD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEEECCHHHHHHHHHHHHHHHHHHCCC
TDFEIINNVESLNCDVGFIEGECNSQVIATSLWAKDKLKIICRVNHTLTTQNNLKIKDLL
CCHHHHCCHHHCCCCEEEEECCCCCCCHHHHHHCCCCEEEEEEECCEEECCCCCCHHHHH
EYEWATREQGSGTFEIFFNALEDKVSSIKKAITLRSSEAIKQYVAYSDCLACISEVITTQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ALDTTKYSILETKDLDLSRNFYKLLHKKKYHTALTQAFCDFIEKDINGCDIRLENFSI
HHCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]