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The map label for this gene is yafJ [C]

Identifier: 134302174

GI number: 134302174

Start: 1169627

End: 1171378

Strand: Reverse

Name: yafJ [C]

Synonym: FTW_1241

Alternate gene names: 134302174

Gene position: 1171378-1169627 (Counterclockwise)

Preceding gene: 134302175

Following gene: 134302172

Centisome position: 61.7

GC content: 32.25

Gene sequence:

>1752_bases
ATGTTCAGTAACATCTTAGCGATATCTTCAGATTGTCCAATCTCTCCTAAAGTTGATTTAATTAATGATAATGTTTCTTC
AGATACTATTAGAGACTTTATGTGGGGAATTGGTTGGTATCATTCAGATCATAATGAAGCAACTATCTTAAAAGAAAGTC
ATGTTGAGAGTGTCGATGTTTTAAGATCTCTGTTCAAAGATAATTCAAATTTTATCTCAAATAGTTTCATAGGTCATATT
TATAGTCATAGTTTATTTGATAAAACAAATCTAAACTTACAACCATTTGTAAAACCTTATGCTGGTAAAGAGTGGACTTT
GGTCCATAATGGTGATTTAAATTATGGTTATGAAAATATCTTAAAACTTACTGTCACTGATTATGAACCAGTTGGTAAAA
CTGACTCAGAGTACATTTTGTGTTGGTTTTTATCACAACTAAGAAAAAAACAAATACGTGACTTAAATGATGATAATTTG
TTTATTATTCATGAATTACTAAAAAAAATTAATGAAGTAGGCCAAGCAAATTTAATTATCTCAAATGGTGATGTCACCAT
AGTCTACCAAGATATTAATGATTTTAATCCTATTTACTATTCAAGATTTTTTCCACCAATCAATTTTTGTAATTTGGTTA
TTGGCGATATTAAAGTCACTACGGGTTTAAATGAGGATAACCTTAGAACATATATGATATTCTCTAATATAAGAGGTAGT
GGTAATTCTTGGCGTCGTCTAGAAGCTGGAAAAATGGTTGTAGCCTCTCATGGTCGAGTCATATGGAACAGTGATAAGAA
AAGTAGTAATTATGGTGGACATAAATTTCAAGAAAAACCCGTTGCAGCGCCAGTTATTAAAATGGGTGTTGAGTTTTTAG
AACGTGTTTTATATATTGTCCATGAGACTAAATACACATATCAAAATACGGTAAATCTTAGTAAACATATTATCAAGATG
AAGCCTGTTATTGATGCTAAGCAAAAATTATTTAGTCATAGTTTAGATATTTCTGTAGCATGTGACAAAGAAGAATATGT
CGATGTATTTGGTAATGATGTAATGTTTTTAAAAACTAGAGAGCCATATACAGAATTTACGGTAAAAATGGAAACAAAAG
TTGCTGTTAGTACAAACCATTATATTCGTAAAAAGTCGATAAATAATCGTGCGACAATGCCAATTGCATGGATGCCATGG
CAAAGACAGATGATGGCACCATACTTACTATCAGTTGAGTTACCACAAACACAACTTGAAGAGCTGATGGATTATGCTGT
TTCATTTGTTAAAAGAAATGATAGTAATGTTATGGCTATCCTTGATGATATTAACAAGACGATATTTTATGAATATAAAT
ATGTTTCTGGTTCAACAAATCTTACAACTACAGCGTATGATGTGTATGTTACAAGACAGGGCGTTTGTCAGGATTTTTCA
AACCTATTTATTTGTCTAGCGCGACTTTTAGGTATTCCGGCACGTTATCGTTCTGGTTATATATTTAATGGAGGTAATTA
TAGTAATACTGCTATGAGTGATGCTACACATGCTTGGGTTGAAGTTTATATTCCTTGGATTGGTTGGGTAGGTTATGATC
CGACTAATGGTTGCGAGGTTAATAGTGATCATGTGCGTATTGCTTGTGGGCGTCATTATATCGATGCAACGCCTACAGCC
GGAACTATATACCGTGGAGGTGGTAGCGAGACTTTATCTATAGATGTTAAAGTTTTTGATATAACTGAATAA

Upstream 100 bases:

>100_bases
GCTGAGCTTACGACACTTATTTCAAAAGAGTTTTTTATTTCTGATGTTAATTTCTATATAGCAATGTTAGAAAAACATAA
TTAAAAAAGGAATATTCTGA

Downstream 100 bases:

>100_bases
TCAAAGTAAATCTATTATTGGTGAAGTCAGATTTAGCTATTTTTTATTTTTATTCAAAAGATGAGATAAGACTAACATAA
TACTTAACACCATTTAGCAT

Product: transglutaminase-like superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MFSNILAISSDCPISPKVDLINDNVSSDTIRDFMWGIGWYHSDHNEATILKESHVESVDVLRSLFKDNSNFISNSFIGHI
YSHSLFDKTNLNLQPFVKPYAGKEWTLVHNGDLNYGYENILKLTVTDYEPVGKTDSEYILCWFLSQLRKKQIRDLNDDNL
FIIHELLKKINEVGQANLIISNGDVTIVYQDINDFNPIYYSRFFPPINFCNLVIGDIKVTTGLNEDNLRTYMIFSNIRGS
GNSWRRLEAGKMVVASHGRVIWNSDKKSSNYGGHKFQEKPVAAPVIKMGVEFLERVLYIVHETKYTYQNTVNLSKHIIKM
KPVIDAKQKLFSHSLDISVACDKEEYVDVFGNDVMFLKTREPYTEFTVKMETKVAVSTNHYIRKKSINNRATMPIAWMPW
QRQMMAPYLLSVELPQTQLEELMDYAVSFVKRNDSNVMAILDDINKTIFYEYKYVSGSTNLTTTAYDVYVTRQGVCQDFS
NLFICLARLLGIPARYRSGYIFNGGNYSNTAMSDATHAWVEVYIPWIGWVGYDPTNGCEVNSDHVRIACGRHYIDATPTA
GTIYRGGGSETLSIDVKVFDITE

Sequences:

>Translated_583_residues
MFSNILAISSDCPISPKVDLINDNVSSDTIRDFMWGIGWYHSDHNEATILKESHVESVDVLRSLFKDNSNFISNSFIGHI
YSHSLFDKTNLNLQPFVKPYAGKEWTLVHNGDLNYGYENILKLTVTDYEPVGKTDSEYILCWFLSQLRKKQIRDLNDDNL
FIIHELLKKINEVGQANLIISNGDVTIVYQDINDFNPIYYSRFFPPINFCNLVIGDIKVTTGLNEDNLRTYMIFSNIRGS
GNSWRRLEAGKMVVASHGRVIWNSDKKSSNYGGHKFQEKPVAAPVIKMGVEFLERVLYIVHETKYTYQNTVNLSKHIIKM
KPVIDAKQKLFSHSLDISVACDKEEYVDVFGNDVMFLKTREPYTEFTVKMETKVAVSTNHYIRKKSINNRATMPIAWMPW
QRQMMAPYLLSVELPQTQLEELMDYAVSFVKRNDSNVMAILDDINKTIFYEYKYVSGSTNLTTTAYDVYVTRQGVCQDFS
NLFICLARLLGIPARYRSGYIFNGGNYSNTAMSDATHAWVEVYIPWIGWVGYDPTNGCEVNSDHVRIACGRHYIDATPTA
GTIYRGGGSETLSIDVKVFDITE
>Mature_583_residues
MFSNILAISSDCPISPKVDLINDNVSSDTIRDFMWGIGWYHSDHNEATILKESHVESVDVLRSLFKDNSNFISNSFIGHI
YSHSLFDKTNLNLQPFVKPYAGKEWTLVHNGDLNYGYENILKLTVTDYEPVGKTDSEYILCWFLSQLRKKQIRDLNDDNL
FIIHELLKKINEVGQANLIISNGDVTIVYQDINDFNPIYYSRFFPPINFCNLVIGDIKVTTGLNEDNLRTYMIFSNIRGS
GNSWRRLEAGKMVVASHGRVIWNSDKKSSNYGGHKFQEKPVAAPVIKMGVEFLERVLYIVHETKYTYQNTVNLSKHIIKM
KPVIDAKQKLFSHSLDISVACDKEEYVDVFGNDVMFLKTREPYTEFTVKMETKVAVSTNHYIRKKSINNRATMPIAWMPW
QRQMMAPYLLSVELPQTQLEELMDYAVSFVKRNDSNVMAILDDINKTIFYEYKYVSGSTNLTTTAYDVYVTRQGVCQDFS
NLFICLARLLGIPARYRSGYIFNGGNYSNTAMSDATHAWVEVYIPWIGWVGYDPTNGCEVNSDHVRIACGRHYIDATPTA
GTIYRGGGSETLSIDVKVFDITE

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0607 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 66700; Mature: 66700

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNILAISSDCPISPKVDLINDNVSSDTIRDFMWGIGWYHSDHNEATILKESHVESVDV
CCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEECCCCCEEEEEHHCCHHHHH
LRSLFKDNSNFISNSFIGHIYSHSLFDKTNLNLQPFVKPYAGKEWTLVHNGDLNYGYENI
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCE
LKLTVTDYEPVGKTDSEYILCWFLSQLRKKQIRDLNDDNLFIIHELLKKINEVGQANLII
EEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEEE
SNGDVTIVYQDINDFNPIYYSRFFPPINFCNLVIGDIKVTTGLNEDNLRTYMIFSNIRGS
ECCCEEEEEECCCCCCCCHHHHCCCCCCCHHEEEEEEEEEECCCCCCCEEEEEEECCCCC
GNSWRRLEAGKMVVASHGRVIWNSDKKSSNYGGHKFQEKPVAAPVIKMGVEFLERVLYIV
CCCCEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HETKYTYQNTVNLSKHIIKMKPVIDAKQKLFSHSLDISVACDKEEYVDVFGNDVMFLKTR
HCCCEEEECCCCHHHHEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEEEEEC
EPYTEFTVKMETKVAVSTNHYIRKKSINNRATMPIAWMPWQRQMMAPYLLSVELPQTQLE
CCCEEEEEEEEEEEEEECCCEEEECCCCCCCCCEEEECCCHHHHCCCEEEEEECCHHHHH
ELMDYAVSFVKRNDSNVMAILDDINKTIFYEYKYVSGSTNLTTTAYDVYVTRQGVCQDFS
HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHH
NLFICLARLLGIPARYRSGYIFNGGNYSNTAMSDATHAWVEVYIPWIGWVGYDPTNGCEV
HHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCCCEEEEEEEEEHEEECCCCCCCCCCC
NSDHVRIACGRHYIDATPTAGTIYRGGGSETLSIDVKVFDITE
CCCCEEEEECCEEECCCCCCCEEEECCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MFSNILAISSDCPISPKVDLINDNVSSDTIRDFMWGIGWYHSDHNEATILKESHVESVDV
CCCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEECCCCCEEEEEHHCCHHHHH
LRSLFKDNSNFISNSFIGHIYSHSLFDKTNLNLQPFVKPYAGKEWTLVHNGDLNYGYENI
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCE
LKLTVTDYEPVGKTDSEYILCWFLSQLRKKQIRDLNDDNLFIIHELLKKINEVGQANLII
EEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEEE
SNGDVTIVYQDINDFNPIYYSRFFPPINFCNLVIGDIKVTTGLNEDNLRTYMIFSNIRGS
ECCCEEEEEECCCCCCCCHHHHCCCCCCCHHEEEEEEEEEECCCCCCCEEEEEEECCCCC
GNSWRRLEAGKMVVASHGRVIWNSDKKSSNYGGHKFQEKPVAAPVIKMGVEFLERVLYIV
CCCCEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HETKYTYQNTVNLSKHIIKMKPVIDAKQKLFSHSLDISVACDKEEYVDVFGNDVMFLKTR
HCCCEEEECCCCHHHHEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHCCCCEEEEEEC
EPYTEFTVKMETKVAVSTNHYIRKKSINNRATMPIAWMPWQRQMMAPYLLSVELPQTQLE
CCCEEEEEEEEEEEEEECCCEEEECCCCCCCCCEEEECCCHHHHCCCEEEEEECCHHHHH
ELMDYAVSFVKRNDSNVMAILDDINKTIFYEYKYVSGSTNLTTTAYDVYVTRQGVCQDFS
HHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEEEECCHHHHHHH
NLFICLARLLGIPARYRSGYIFNGGNYSNTAMSDATHAWVEVYIPWIGWVGYDPTNGCEV
HHHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCCCCEEEEEEEEEHEEECCCCCCCCCCC
NSDHVRIACGRHYIDATPTAGTIYRGGGSETLSIDVKVFDITE
CCCCEEEEECCEEECCCCCCCEEEECCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]