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The map label for this gene is ygfY [C]

Identifier: 134302139

GI number: 134302139

Start: 1126783

End: 1127070

Strand: Reverse

Name: ygfY [C]

Synonym: FTW_1190

Alternate gene names: 134302139

Gene position: 1127070-1126783 (Counterclockwise)

Preceding gene: 134302141

Following gene: 134302138

Centisome position: 59.37

GC content: 28.12

Gene sequence:

>288_bases
ATGCTAATAAAAAATAATGATCTTATATTTAGTTCAGTTGATAAGATAAAGTACTCTGCGCGCAGAGGTATGCTAGAGCT
TGATATAATTTTAGCGCCATATTTAAATAATTGTTATATGCATGAAGATCTTGCTAATAAAAAGCTTTTTGTTGAGTTTT
TGACTAGTGAAGATAGTGATATGTTTGATTGGCTTTTTAAGGGAGTTACTCCGCCACAAAGATATCAACAACTTATAGAC
AAAATTATCAAAGAAAAGAAAAAATTTAATCAAACTAAATTAAAGTAG

Upstream 100 bases:

>100_bases
TTAAAAGAGTATTTTTTGAAATAATTTATATAACTATATTGGTTGTCTTAAGCGTATAGTATAAACTAGTGTAATCCATA
TATTTATATTTCTATTAAAT

Downstream 100 bases:

>100_bases
CTAAAAGGTGTGTTATATGAATGACTTACTAAATCACTCAGGAGAATATCCTATTTCTAAAGAAATAATGAATATATCTA
AATATTGGCTTATCGATGAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MLIKNNDLIFSSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSDMFDWLFKGVTPPQRYQQLID
KIIKEKKKFNQTKLK

Sequences:

>Translated_95_residues
MLIKNNDLIFSSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSDMFDWLFKGVTPPQRYQQLID
KIIKEKKKFNQTKLK
>Mature_95_residues
MLIKNNDLIFSSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSDMFDWLFKGVTPPQRYQQLID
KIIKEKKKFNQTKLK

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1151_FRATT (Q5NFS4)

Other databases:

- EMBL:   AJ749949
- RefSeq:   YP_170118.1
- ProteinModelPortal:   Q5NFS4
- SMR:   Q5NFS4
- GeneID:   3191681
- GenomeReviews:   AJ749949_GR
- KEGG:   ftu:FTT_1151c
- HOGENOM:   HBG482627
- OMA:   LTSEDND
- ProtClustDB:   CLSK934866
- InterPro:   IPR005631
- Gene3D:   G3DSA:1.10.150.250

Pfam domain/function: PF03937 DUF339; SSF109910 DUF339

EC number: NA

Molecular weight: Translated: 11321; Mature: 11321

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKNNDLIFSSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSD
CCCCCCCEEEHHHHHHHHHHHCCCEEEEHHHCCHHCCCEECHHHCCHHHHHHHHCCCCCH
MFDWLFKGVTPPQRYQQLIDKIIKEKKKFNQTKLK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLIKNNDLIFSSVDKIKYSARRGMLELDIILAPYLNNCYMHEDLANKKLFVEFLTSEDSD
CCCCCCCEEEHHHHHHHHHHHCCCEEEEHHHCCHHCCCEECHHHCCHHHHHHHHCCCCCH
MFDWLFKGVTPPQRYQQLIDKIIKEKKKFNQTKLK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA