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The map label for this gene is tdk [H]

Identifier: 134302071

GI number: 134302071

Start: 1049411

End: 1050004

Strand: Reverse

Name: tdk [H]

Synonym: FTW_1107

Alternate gene names: 134302071

Gene position: 1050004-1049411 (Counterclockwise)

Preceding gene: 134302072

Following gene: 134302070

Centisome position: 55.31

GC content: 33.84

Gene sequence:

>594_bases
GTGGCGAAATTATATTTTAGATATTCGGCTATGGATGCTGGTAAGACACTAGATCTTTTAAAAGTTGCTTATAACTATGA
AGATAGAGATAGGAAGCCCTTAGTATTAACATCAGCGATTGATAAAAGAGCGGGGTTAAATAAAGTTAAATCACGCATAG
GTATAGATCAGGATGCTTACTCACTGACTGATAGAGATAATATTTTTGAATTTGTCGAAAATTATAATAGTAGTAACAAG
ATAGATTGTGTATTGATAGATGAAATTCATTTTTTTACTCAAGAGCAAGTTTGGCAATTAGCAGAGATAGTTGATGAACT
AAATATTCCTGTGATTTGCTATGGGTTACGTACTAATTACTTAGGTCAGCCATTTGAGACAGCAGCATTACTTTTGGCTA
TTGCTGATACTCTTGAAGAAGTCAAAACAATTTGTCACTGCGGTAAAAAAGCAAGCTTTAATATGATGGTGCAGAATGGT
AAAGCAATAAAACAAGGTAATCCCATAGTGGTTGATGATGATTCGCTTAAAGAGATAGATACCAAATATGTCTCTGTATG
TCGTAAGCACTGGAAAGAAGGTGTGTATGAATAA

Upstream 100 bases:

>100_bases
GCGTAATGTTGATAATCACAAGTATACTATTTTTGGTGAAAAGTATTATATTTTTCCAAATCCAATGTATGGCAGCTGGC
AATAATAGAGGGTTTTTGTA

Downstream 100 bases:

>100_bases
TATAGCAACTAAAGAAGGATAGTACTAATAAGTTAAATTTTACTAACGGATATTAATTTTCCTAGTTAATATCCTATATA
AAATATAAGCAATTAGAGCA

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAKLYFRYSAMDAGKTLDLLKVAYNYEDRDRKPLVLTSAIDKRAGLNKVKSRIGIDQDAYSLTDRDNIFEFVENYNSSNK
IDCVLIDEIHFFTQEQVWQLAEIVDELNIPVICYGLRTNYLGQPFETAALLLAIADTLEEVKTICHCGKKASFNMMVQNG
KAIKQGNPIVVDDDSLKEIDTKYVSVCRKHWKEGVYE

Sequences:

>Translated_197_residues
MAKLYFRYSAMDAGKTLDLLKVAYNYEDRDRKPLVLTSAIDKRAGLNKVKSRIGIDQDAYSLTDRDNIFEFVENYNSSNK
IDCVLIDEIHFFTQEQVWQLAEIVDELNIPVICYGLRTNYLGQPFETAALLLAIADTLEEVKTICHCGKKASFNMMVQNG
KAIKQGNPIVVDDDSLKEIDTKYVSVCRKHWKEGVYE
>Mature_196_residues
AKLYFRYSAMDAGKTLDLLKVAYNYEDRDRKPLVLTSAIDKRAGLNKVKSRIGIDQDAYSLTDRDNIFEFVENYNSSNKI
DCVLIDEIHFFTQEQVWQLAEIVDELNIPVICYGLRTNYLGQPFETAALLLAIADTLEEVKTICHCGKKASFNMMVQNGK
AIKQGNPIVVDDDSLKEIDTKYVSVCRKHWKEGVYE

Specific function: Phosphorylates Both Thymidine And Deoxyuridine. [C]

COG id: COG1435

COG function: function code F; Thymidine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine kinase family [H]

Homologues:

Organism=Escherichia coli, GI1787490, Length=196, Percent_Identity=44.3877551020408, Blast_Score=179, Evalue=8e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001267
- InterPro:   IPR020634 [H]

Pfam domain/function: PF00265 TK [H]

EC number: =2.7.1.21 [H]

Molecular weight: Translated: 22532; Mature: 22401

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLYFRYSAMDAGKTLDLLKVAYNYEDRDRKPLVLTSAIDKRAGLNKVKSRIGIDQDAY
CCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHCCHHHHHHHHCCCCCHH
SLTDRDNIFEFVENYNSSNKIDCVLIDEIHFFTQEQVWQLAEIVDELNIPVICYGLRTNY
CCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
LGQPFETAALLLAIADTLEEVKTICHCGKKASFNMMVQNGKAIKQGNPIVVDDDSLKEID
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCEEECCCCHHHHH
TKYVSVCRKHWKEGVYE
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKLYFRYSAMDAGKTLDLLKVAYNYEDRDRKPLVLTSAIDKRAGLNKVKSRIGIDQDAY
CEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHHCCHHHHHHHHCCCCCHH
SLTDRDNIFEFVENYNSSNKIDCVLIDEIHFFTQEQVWQLAEIVDELNIPVICYGLRTNY
CCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
LGQPFETAALLLAIADTLEEVKTICHCGKKASFNMMVQNGKAIKQGNPIVVDDDSLKEID
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCEEECCCCHHHHH
TKYVSVCRKHWKEGVYE
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA