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The map label for this gene is yccA [H]

Identifier: 134302050

GI number: 134302050

Start: 1022965

End: 1023651

Strand: Direct

Name: yccA [H]

Synonym: FTW_1084

Alternate gene names: 134302050

Gene position: 1022965-1023651 (Clockwise)

Preceding gene: 134302049

Following gene: 134302051

Centisome position: 53.88

GC content: 33.48

Gene sequence:

>687_bases
ATGAACAACTTACAAAACAACACTCGTGTGATAGACTCCCTCTCTCAAGAGTCTGTACTAAGAGCAAACAAAGTTCTTAG
AAATACATACTGGTTGCTATCTATGACACTACTATTTAGTGCTTTTACAGCATTTATAGCAATGAGCACAGGTGCAACGA
TAATGAATCCATTATTAATGCTAGTAGTTTATATTGGTTTATTATTTGGTATTAATGCTACTAAAAACTCACCATGGGGT
ATAGTTTTAACTTTTGCGCTAACAGGTCTTTTAGGCTATTCGCTTGGTCCTATACTTAATATGTACCTTACTATGTTTAA
AAACGGTGCAGAACTAATCATGATGGCATTTGGAACTACTGGTCTGATTTTTCTAGGCTTATCTGTAGTTGCAATGAGCC
CTGCAAGAAATTTTAATAGATTAGGTTCATTCTGTGCGATTGGTGCGATTGTTGCATTAGTAGCTTTAGTAATTAATATA
TTCCTACAACTTCCTGCTTTAGCTTTAGTTATATCACTAGTATTTGCATTCATATCTGGTGGTTTTATATTATGGCAAAC
AAATGCTATTGTAAGAGGTGAAGAAACTAACTACATATTAGCTACTGTAAATATTTATGTGTCTTTATTCAATATCTTTG
TAACTCTATTACAAATCTTTGGTGCAGTAGCTGGCGATAGAGAATAA

Upstream 100 bases:

>100_bases
ATTCAGCTTTATTCCCCATATTTAACGGTATGTAATTATGTTATAATTAGTTGCTAATAAAACTTTATTGACTATACAAG
ATAAATTTAAAGGAGAAAAA

Downstream 100 bases:

>100_bases
TTTATATTATCATTTACTTAAATTTCTAATCTGATAATTTATTAATGCTTAATAACCAAATATCTGCTAATGATACAGTT
GTATCTAATGCTTATGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNNLQNNTRVIDSLSQESVLRANKVLRNTYWLLSMTLLFSAFTAFIAMSTGATIMNPLLMLVVYIGLLFGINATKNSPWG
IVLTFALTGLLGYSLGPILNMYLTMFKNGAELIMMAFGTTGLIFLGLSVVAMSPARNFNRLGSFCAIGAIVALVALVINI
FLQLPALALVISLVFAFISGGFILWQTNAIVRGEETNYILATVNIYVSLFNIFVTLLQIFGAVAGDRE

Sequences:

>Translated_228_residues
MNNLQNNTRVIDSLSQESVLRANKVLRNTYWLLSMTLLFSAFTAFIAMSTGATIMNPLLMLVVYIGLLFGINATKNSPWG
IVLTFALTGLLGYSLGPILNMYLTMFKNGAELIMMAFGTTGLIFLGLSVVAMSPARNFNRLGSFCAIGAIVALVALVINI
FLQLPALALVISLVFAFISGGFILWQTNAIVRGEETNYILATVNIYVSLFNIFVTLLQIFGAVAGDRE
>Mature_228_residues
MNNLQNNTRVIDSLSQESVLRANKVLRNTYWLLSMTLLFSAFTAFIAMSTGATIMNPLLMLVVYIGLLFGINATKNSPWG
IVLTFALTGLLGYSLGPILNMYLTMFKNGAELIMMAFGTTGLIFLGLSVVAMSPARNFNRLGSFCAIGAIVALVALVINI
FLQLPALALVISLVFAFISGGFILWQTNAIVRGEETNYILATVNIYVSLFNIFVTLLQIFGAVAGDRE

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=222, Percent_Identity=48.1981981981982, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24782; Mature: 24782

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLQNNTRVIDSLSQESVLRANKVLRNTYWLLSMTLLFSAFTAFIAMSTGATIMNPLLM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LVVYIGLLFGINATKNSPWGIVLTFALTGLLGYSLGPILNMYLTMFKNGAELIMMAFGTT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCHH
GLIFLGLSVVAMSPARNFNRLGSFCAIGAIVALVALVINIFLQLPALALVISLVFAFISG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFILWQTNAIVRGEETNYILATVNIYVSLFNIFVTLLQIFGAVAGDRE
CEEEEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNLQNNTRVIDSLSQESVLRANKVLRNTYWLLSMTLLFSAFTAFIAMSTGATIMNPLLM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LVVYIGLLFGINATKNSPWGIVLTFALTGLLGYSLGPILNMYLTMFKNGAELIMMAFGTT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHCHH
GLIFLGLSVVAMSPARNFNRLGSFCAIGAIVALVALVINIFLQLPALALVISLVFAFISG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFILWQTNAIVRGEETNYILATVNIYVSLFNIFVTLLQIFGAVAGDRE
CEEEEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]