| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is yheS [H]
Identifier: 134301992
GI number: 134301992
Start: 960930
End: 962816
Strand: Reverse
Name: yheS [H]
Synonym: FTW_1011
Alternate gene names: 134301992
Gene position: 962816-960930 (Counterclockwise)
Preceding gene: 134301994
Following gene: 134301987
Centisome position: 50.72
GC content: 31.74
Gene sequence:
>1887_bases ATGATTTTCTTTAAAAATGTATCTTATCAAGTTGAGATAAAAGAGCTTTTTGATAATATAAATTTCTCAATTTTTCCTAA TCAAAAAATAGGTCTAGTTGGTAAGAATGGTACAGGTAAAACTACACTTTTTAACCTTATACAAGGTAATCTAACACCTG ATAAAGGTGATATTGAGATTGCTAAAAATACTCGTATAGTCACTGTCAAGCAAGAGGTTGATGATTTCGAAGTCAAAGTA ATAGATTATGTAGTCAATGGTATAGAGTCTTTAAAACAATTAAAGATTAAAATGCAGGATTCTTTAGCAAGTGAGAATTT CGTTGATTATTCAAAATATCATGAAGAGTATGAATCTTTAGGAGGCTATGCAATAGAGTCTCAAGCTGGTAAACTGCTGT CAGGTTTGGGTTTTAGCGTTAGTCAACTCCAACAAAAGGTAAAAGAGCTATCTGGTGGTTGGCAGATACGATTAAATCTT GCTCAAGCACTGCTGCAAGAGTCAGATATTTTATTACTTGATGAACCAACTAACCATTTAGATTTAGATGCGGTTTTGTG GTTAGAAGAATATCTACAAGAATATAAAGGTTCTTTGCTACTTATTTCACATGATAGGATTTTTTTGGATAATGTAGTTA AGCAAATATTTTATATCGATAATAAGAATATAGATACTTATACTGGTAACTATTCATCTTATGAAAAGCAGTCTTATGAG CAAAAAGTACTCCAACAAAAGCAGTTTGAGAAACAACAAAAACATATTGCTCATCTAGAGAGTTTTGTAAATAGATTTAA AGCAAAAGCCTCAAAAGCAAAACAAGCGCAAAGTCGTGTCAAGATGTTAGAAAAAATACAACGAATAGAAGCTGTTAAAT CAGATTCTGAATTTAGCTTTGAATTTAAGCAAGTTAAAGAACATCTTGGAGGCACTTTAGTCAGTTTACAAAATGCAGAT CTTGGCTATGGTACTAAAAAAATTCTTAATAACGTAAAACTAAATATCTACAATGAAATGCGTATAGGTCTATTGGGTCT AAATGGTGCTGGTAAATCAACTTTGATTAAGTCTTTAATTGGCGATATTGATATTTTATCAGGTAAAATAGAAAAACATC CAAACCTAAGAGTGGGATATTTTTCGCAGCATTCATTGGATATGCTTGATTTACAAGCTTCGCCACTATTACATATGCAG CGCTTAGACTCACAAGTAACTCAAGAAAAGCTTAGAACTTTTTTAGGAAGTTTTAACTTTGTAGGCGATAAGGCTTTAGC AAAAGCAGGGACTTTTTCTGGTGGTGAAAAAGCTAGGTTAGTTTTAGCAATCATAGTTTATCAACAACCTAATTTTCTTT TGTTAGATGAACCAACTAACCATCTAGATATTGGAGTACGCGAAGCTTTAACTGTAGCATTACAGAGTTTCCAAGGAGCT ATAATATTGGTTTCGCATGATAGATTTTTACTAGAGTCAACAGTTGATGAATATATGCTTGTAGGCGAAGGACAAGTTAA GCCATTTGATGGTGATATGAAAGGTTATTATAAATATATTCTCGAGGTTAAAAAAACACAGAATAATACATCAAATATAG CTGGACAAATCAATGAAGACTCAAAAAAACAGAATCGAAGACTATCTGCAGATAAAAGAAAACAGCTAAAGCCACTTCAG GATAAAATTAAAAAACTTGAAAGGGCATTAGAGAAGTTACAACAGCAAGATTTACAAATGCAAGATGCTCTTCAAGATCA AAGTTTGTATGATGATAAAGAGAAATTACAACAGACTTTGCTTGAGCACTCTAATTTAAAAGGAAAAATTGAAGAAATTG AATTAGATTGGTTTGTAGCACTCGAAGAATTAGAATCTATTAACTAA
Upstream 100 bases:
>100_bases TTAAAATATTATTTAAAGATAATACAGTAAAACAAGTCATTTTTATATTAAATCATAGAGTATATAATTAGCGTTAATAA ATATAAAAATTATAACTAAT
Downstream 100 bases:
>100_bases AATTAGGCGCTATAAGCCTCGTCCCAACTACCTGTTAAACCAGCAACTTCATATTCGGTGACACGGTTTTCGAAGAAGTT AGTGTGATCTGCACCATTTA
Product: ABC transporters, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MIFFKNVSYQVEIKELFDNINFSIFPNQKIGLVGKNGTGKTTLFNLIQGNLTPDKGDIEIAKNTRIVTVKQEVDDFEVKV IDYVVNGIESLKQLKIKMQDSLASENFVDYSKYHEEYESLGGYAIESQAGKLLSGLGFSVSQLQQKVKELSGGWQIRLNL AQALLQESDILLLDEPTNHLDLDAVLWLEEYLQEYKGSLLLISHDRIFLDNVVKQIFYIDNKNIDTYTGNYSSYEKQSYE QKVLQQKQFEKQQKHIAHLESFVNRFKAKASKAKQAQSRVKMLEKIQRIEAVKSDSEFSFEFKQVKEHLGGTLVSLQNAD LGYGTKKILNNVKLNIYNEMRIGLLGLNGAGKSTLIKSLIGDIDILSGKIEKHPNLRVGYFSQHSLDMLDLQASPLLHMQ RLDSQVTQEKLRTFLGSFNFVGDKALAKAGTFSGGEKARLVLAIIVYQQPNFLLLDEPTNHLDIGVREALTVALQSFQGA IILVSHDRFLLESTVDEYMLVGEGQVKPFDGDMKGYYKYILEVKKTQNNTSNIAGQINEDSKKQNRRLSADKRKQLKPLQ DKIKKLERALEKLQQQDLQMQDALQDQSLYDDKEKLQQTLLEHSNLKGKIEEIELDWFVALEELESIN
Sequences:
>Translated_628_residues MIFFKNVSYQVEIKELFDNINFSIFPNQKIGLVGKNGTGKTTLFNLIQGNLTPDKGDIEIAKNTRIVTVKQEVDDFEVKV IDYVVNGIESLKQLKIKMQDSLASENFVDYSKYHEEYESLGGYAIESQAGKLLSGLGFSVSQLQQKVKELSGGWQIRLNL AQALLQESDILLLDEPTNHLDLDAVLWLEEYLQEYKGSLLLISHDRIFLDNVVKQIFYIDNKNIDTYTGNYSSYEKQSYE QKVLQQKQFEKQQKHIAHLESFVNRFKAKASKAKQAQSRVKMLEKIQRIEAVKSDSEFSFEFKQVKEHLGGTLVSLQNAD LGYGTKKILNNVKLNIYNEMRIGLLGLNGAGKSTLIKSLIGDIDILSGKIEKHPNLRVGYFSQHSLDMLDLQASPLLHMQ RLDSQVTQEKLRTFLGSFNFVGDKALAKAGTFSGGEKARLVLAIIVYQQPNFLLLDEPTNHLDIGVREALTVALQSFQGA IILVSHDRFLLESTVDEYMLVGEGQVKPFDGDMKGYYKYILEVKKTQNNTSNIAGQINEDSKKQNRRLSADKRKQLKPLQ DKIKKLERALEKLQQQDLQMQDALQDQSLYDDKEKLQQTLLEHSNLKGKIEEIELDWFVALEELESIN >Mature_628_residues MIFFKNVSYQVEIKELFDNINFSIFPNQKIGLVGKNGTGKTTLFNLIQGNLTPDKGDIEIAKNTRIVTVKQEVDDFEVKV IDYVVNGIESLKQLKIKMQDSLASENFVDYSKYHEEYESLGGYAIESQAGKLLSGLGFSVSQLQQKVKELSGGWQIRLNL AQALLQESDILLLDEPTNHLDLDAVLWLEEYLQEYKGSLLLISHDRIFLDNVVKQIFYIDNKNIDTYTGNYSSYEKQSYE QKVLQQKQFEKQQKHIAHLESFVNRFKAKASKAKQAQSRVKMLEKIQRIEAVKSDSEFSFEFKQVKEHLGGTLVSLQNAD LGYGTKKILNNVKLNIYNEMRIGLLGLNGAGKSTLIKSLIGDIDILSGKIEKHPNLRVGYFSQHSLDMLDLQASPLLHMQ RLDSQVTQEKLRTFLGSFNFVGDKALAKAGTFSGGEKARLVLAIIVYQQPNFLLLDEPTNHLDIGVREALTVALQSFQGA IILVSHDRFLLESTVDEYMLVGEGQVKPFDGDMKGYYKYILEVKKTQNNTSNIAGQINEDSKKQNRRLSADKRKQLKPLQ DKIKKLERALEKLQQQDLQMQDALQDQSLYDDKEKLQQTLLEHSNLKGKIEEIELDWFVALEELESIN
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=537, Percent_Identity=33.8919925512104, Blast_Score=320, Evalue=2e-87, Organism=Homo sapiens, GI27881506, Length=525, Percent_Identity=34.6666666666667, Blast_Score=300, Evalue=4e-81, Organism=Homo sapiens, GI10947137, Length=525, Percent_Identity=34.6666666666667, Blast_Score=299, Evalue=5e-81, Organism=Homo sapiens, GI10947135, Length=534, Percent_Identity=32.9588014981273, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI69354671, Length=546, Percent_Identity=32.6007326007326, Blast_Score=254, Evalue=2e-67, Organism=Escherichia coli, GI1789751, Length=632, Percent_Identity=45.0949367088608, Blast_Score=562, Evalue=1e-161, Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=34.469696969697, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1787182, Length=584, Percent_Identity=30.1369863013699, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI2367384, Length=524, Percent_Identity=30.7251908396947, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1788165, Length=196, Percent_Identity=32.1428571428571, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1788761, Length=221, Percent_Identity=25.3393665158371, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI48994997, Length=211, Percent_Identity=23.2227488151659, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=35.2720450281426, Blast_Score=316, Evalue=2e-86, Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=31.4545454545455, Blast_Score=282, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17555318, Length=515, Percent_Identity=32.4271844660194, Blast_Score=271, Evalue=7e-73, Organism=Caenorhabditis elegans, GI17565586, Length=320, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=33.5195530726257, Blast_Score=320, Evalue=4e-88, Organism=Saccharomyces cerevisiae, GI6320874, Length=503, Percent_Identity=34.1948310139165, Blast_Score=292, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6325030, Length=375, Percent_Identity=31.7333333333333, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6324314, Length=398, Percent_Identity=28.1407035175879, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=26.6497461928934, Blast_Score=133, Evalue=9e-32, Organism=Drosophila melanogaster, GI24666836, Length=518, Percent_Identity=35.1351351351351, Blast_Score=334, Evalue=9e-92, Organism=Drosophila melanogaster, GI24642252, Length=529, Percent_Identity=34.2155009451796, Blast_Score=303, Evalue=2e-82, Organism=Drosophila melanogaster, GI18859989, Length=529, Percent_Identity=34.2155009451796, Blast_Score=303, Evalue=2e-82, Organism=Drosophila melanogaster, GI24641342, Length=554, Percent_Identity=33.2129963898917, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI116007184, Length=208, Percent_Identity=32.2115384615385, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI221500365, Length=208, Percent_Identity=32.2115384615385, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI45550390, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643674, Length=204, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24650853, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24650855, Length=196, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI281362751, Length=197, Percent_Identity=28.4263959390863, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71566; Mature: 71566
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFFKNVSYQVEIKELFDNINFSIFPNQKIGLVGKNGTGKTTLFNLIQGNLTPDKGDIEI CEEEECCCEEEEHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE AKNTRIVTVKQEVDDFEVKVIDYVVNGIESLKQLKIKMQDSLASENFVDYSKYHEEYESL ECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GGYAIESQAGKLLSGLGFSVSQLQQKVKELSGGWQIRLNLAQALLQESDILLLDEPTNHL CCEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEEEEECCCCCC DLDAVLWLEEYLQEYKGSLLLISHDRIFLDNVVKQIFYIDNKNIDTYTGNYSSYEKQSYE CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHH QKVLQQKQFEKQQKHIAHLESFVNRFKAKASKAKQAQSRVKMLEKIQRIEAVKSDSEFSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EFKQVKEHLGGTLVSLQNADLGYGTKKILNNVKLNIYNEMRIGLLGLNGAGKSTLIKSLI HHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCEEEEEEEEEEEEEEECCCCHHHHHHHHH GDIDILSGKIEKHPNLRVGYFSQHSLDMLDLQASPLLHMQRLDSQVTQEKLRTFLGSFNF CCHHHHCCCCCCCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VGDKALAKAGTFSGGEKARLVLAIIVYQQPNFLLLDEPTNHLDIGVREALTVALQSFQGA CCCHHHHHCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCE IILVSHDRFLLESTVDEYMLVGEGQVKPFDGDMKGYYKYILEVKKTQNNTSNIAGQINED EEEEECCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC SKKQNRRLSADKRKQLKPLQDKIKKLERALEKLQQQDLQMQDALQDQSLYDDKEKLQQTL HHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LEHSNLKGKIEEIELDWFVALEELESIN HHHCCCCCCEEEEEHHHHHHHHHHHCCC >Mature Secondary Structure MIFFKNVSYQVEIKELFDNINFSIFPNQKIGLVGKNGTGKTTLFNLIQGNLTPDKGDIEI CEEEECCCEEEEHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE AKNTRIVTVKQEVDDFEVKVIDYVVNGIESLKQLKIKMQDSLASENFVDYSKYHEEYESL ECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GGYAIESQAGKLLSGLGFSVSQLQQKVKELSGGWQIRLNLAQALLQESDILLLDEPTNHL CCEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCEEEEECCCCCC DLDAVLWLEEYLQEYKGSLLLISHDRIFLDNVVKQIFYIDNKNIDTYTGNYSSYEKQSYE CHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHH QKVLQQKQFEKQQKHIAHLESFVNRFKAKASKAKQAQSRVKMLEKIQRIEAVKSDSEFSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EFKQVKEHLGGTLVSLQNADLGYGTKKILNNVKLNIYNEMRIGLLGLNGAGKSTLIKSLI HHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCEEEEEEEEEEEEEEECCCCHHHHHHHHH GDIDILSGKIEKHPNLRVGYFSQHSLDMLDLQASPLLHMQRLDSQVTQEKLRTFLGSFNF CCHHHHCCCCCCCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC VGDKALAKAGTFSGGEKARLVLAIIVYQQPNFLLLDEPTNHLDIGVREALTVALQSFQGA CCCHHHHHCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHCCCE IILVSHDRFLLESTVDEYMLVGEGQVKPFDGDMKGYYKYILEVKKTQNNTSNIAGQINED EEEEECCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC SKKQNRRLSADKRKQLKPLQDKIKKLERALEKLQQQDLQMQDALQDQSLYDDKEKLQQTL HHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LEHSNLKGKIEEIELDWFVALEELESIN HHHCCCCCCEEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]