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The map label for this gene is csoR [H]

Identifier: 134301970

GI number: 134301970

Start: 940696

End: 940968

Strand: Reverse

Name: csoR [H]

Synonym: FTW_0986

Alternate gene names: 134301970

Gene position: 940968-940696 (Counterclockwise)

Preceding gene: 134301971

Following gene: 134301969

Centisome position: 49.56

GC content: 30.04

Gene sequence:

>273_bases
ATGTCAAATCCTTGTCATAAAAAACATTTAGTTAAACTTAATAGGGTAACTGGTCAAGTCGAAGCAATCAAAAGAATGAT
TGATGATCAGCGTTATTGTGTTGATATTATTACCCAAATAAAAGCAGCTCGAAGTGCATTAAAATCTATAGAGTTGAGTA
TTTTAGAGACACATATGCAATCTTGTCTAGAAAAATCTTGTCAGGCAAATTCTAAAGAGGTACTAGAGCAAAGAATAGCA
GAAATTATGAAACTTTTAAGAAAATATCAATAA

Upstream 100 bases:

>100_bases
GTACAAATACTAAATAAATTACTATATCAAAGCTATTTTTTTTAATAAACTTCTTTGTTACTATATACCTATATGGGGTA
TATATGGAAGAGGTTTATAA

Downstream 100 bases:

>100_bases
CGGTAATAAGTATATGAATAAACAACAAGCGATAATTTATAGAATGGTAACAGATAAACATATCTGTCCTTTTGGTATTA
AAGCCAAAGATTTACTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSNPCHKKHLVKLNRVTGQVEAIKRMIDDQRYCVDIITQIKAARSALKSIELSILETHMQSCLEKSCQANSKEVLEQRIA
EIMKLLRKYQ

Sequences:

>Translated_90_residues
MSNPCHKKHLVKLNRVTGQVEAIKRMIDDQRYCVDIITQIKAARSALKSIELSILETHMQSCLEKSCQANSKEVLEQRIA
EIMKLLRKYQ
>Mature_89_residues
SNPCHKKHLVKLNRVTGQVEAIKRMIDDQRYCVDIITQIKAARSALKSIELSILETHMQSCLEKSCQANSKEVLEQRIAE
IMKLLRKYQ

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10427; Mature: 10295

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPCHKKHLVKLNRVTGQVEAIKRMIDDQRYCVDIITQIKAARSALKSIELSILETHMQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCLEKSCQANSKEVLEQRIAEIMKLLRKYQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNPCHKKHLVKLNRVTGQVEAIKRMIDDQRYCVDIITQIKAARSALKSIELSILETHMQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCLEKSCQANSKEVLEQRIAEIMKLLRKYQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]