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The map label for this gene is dtpB [H]

Identifier: 134301908

GI number: 134301908

Start: 878732

End: 880207

Strand: Reverse

Name: dtpB [H]

Synonym: FTW_0913

Alternate gene names: 134301908

Gene position: 880207-878732 (Counterclockwise)

Preceding gene: 134301910

Following gene: 134301907

Centisome position: 46.36

GC content: 29.95

Gene sequence:

>1476_bases
ATGATAAATATAAGAAAACAAAACTCATTCTTTTTACTATGTTTTTTTGAGTTTTTTGAAAGATTTGGCTATTACGGATT
TAGTTATACCGCAATCTTATTCTTTATGAGCAAATATGGTTTTGACTTTACAGAGAAGCAAGCGGTACTTTTATTTGGAG
GATTTGCTTCATTAAGTTATGTTTTTAATGCTATTGGTGGTTATGTTGCTGATAAAGTTTTTGGTATTAAAAGAACAATG
TTCTTGGGAGCAGTTTTTCTTTTAGTTGGGTATTTTAGCCTAGCTTTAAGTCCTTATTTTGTAAATATAGACAATTATGT
ATATATAAGTTTAGCTTGTATTATTGTTGGATCTTCACTATTTAAGCCTGCTCCGACGAACTTAATTTCTAGAATATATA
CAGATAAACTTAAACTTGACTCTGTTTATACATATTTTTATATGTCGATAAATATGGGTTCTTTATCAGCATCCCTTCTA
ATACCTGTTTTAGCAACAAAATATGGTTACACTGCTGCGTATGGAGTGTGTTCTGTAGGTTTTGCAATAGGTATATTAAA
TAGTCTATTGAGTTACGCTAGTATCAAAGATATCGGTAATGAAGTTGATTTTAGAAATATGGGATATCCAAGAACTATTC
TTATAGTGTCAGTTTTTATTATCGTAATAATTGGACTTAGTGTAATACTACAAACTAACGATACGATTAATTATATTTTA
TGGTTTGGTGCTGGTTTAATATTTGGAGTATTTGCTTTTCAAATCTATGTTGAGAAAGATCCTAGTTCAAGAAAAAAGAT
AGTAGCAGCGATTATTTTATTAGTTTATGCAGTATTATTTTTCATAATATATCAGCAAAAATCTACTTCTTTCTTTTTAT
TTAACGTTCATCATGTTAATTTAAATTTATTTGGTTATAGTGTCAATCCTCAGAGTATACCTGGCGTGTTAAATACTGCT
GGTGTGATTATCTTATCGCCAATATTGGCACTTATATATACAAAACTAGGAAAAAAAGATTTTAGTTTACCATTTAAATT
TGCTTTGGGAATCCTATTATGTGGTTTAGCATATGGTAGTATGTTCTTGGCGTGTTTGATTAATGATCCTACAGCTAAAG
TTAGTATACTTTGGGAAGTTTTGGCGATAACTATATTTTTCTCAGCAGGGGAGTTATTGATTTCAGCGCTTGGATTATCT
TTAATGGCTAAGTTACTACCTCAAAGAATCACTGGCTTTGCTATGGGTACATGGTTTATAACTTCAGCTATAGGTATTAA
GATCGGCACAACAATTGCACAAGCAGTTACAAGTGGGATTCAATATGATGAGTCAAAAGGTTTTGATACTCAAATGACTA
TAAGTAGTTTCCATAAATATCAAGACTTATTTGGCTATGTTTCTTTAGTTGCGATAATTTTTGCAGTAATTGCATTTGTA
ATTGGTAAAAAACTTAATAAAATGATTCAAGATTAA

Upstream 100 bases:

>100_bases
GTTGTTAGATTATTAAAAATAATTTTAAATAAGTTTTTTGTTATATTAATGTTTAATAGCAGTTATAATCAAATTTAAAC
TAAATTTACTACGAATATAA

Downstream 100 bases:

>100_bases
ATATATCAACTAAGCTTATAATCTATGCACAATCTTTTATCTACTAAAAAAGCTTTAATTTTGTTGTTGCTAACCATAAC
AATGTGGTCAACCGCTTTTA

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MINIRKQNSFFLLCFFEFFERFGYYGFSYTAILFFMSKYGFDFTEKQAVLLFGGFASLSYVFNAIGGYVADKVFGIKRTM
FLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKLDSVYTYFYMSINMGSLSASLL
IPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYIL
WFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLVYAVLFFIIYQQKSTSFFLFNVHHVNLNLFGYSVNPQSIPGVLNTA
GVIILSPILALIYTKLGKKDFSLPFKFALGILLCGLAYGSMFLACLINDPTAKVSILWEVLAITIFFSAGELLISALGLS
LMAKLLPQRITGFAMGTWFITSAIGIKIGTTIAQAVTSGIQYDESKGFDTQMTISSFHKYQDLFGYVSLVAIIFAVIAFV
IGKKLNKMIQD

Sequences:

>Translated_491_residues
MINIRKQNSFFLLCFFEFFERFGYYGFSYTAILFFMSKYGFDFTEKQAVLLFGGFASLSYVFNAIGGYVADKVFGIKRTM
FLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKLDSVYTYFYMSINMGSLSASLL
IPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYIL
WFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLVYAVLFFIIYQQKSTSFFLFNVHHVNLNLFGYSVNPQSIPGVLNTA
GVIILSPILALIYTKLGKKDFSLPFKFALGILLCGLAYGSMFLACLINDPTAKVSILWEVLAITIFFSAGELLISALGLS
LMAKLLPQRITGFAMGTWFITSAIGIKIGTTIAQAVTSGIQYDESKGFDTQMTISSFHKYQDLFGYVSLVAIIFAVIAFV
IGKKLNKMIQD
>Mature_491_residues
MINIRKQNSFFLLCFFEFFERFGYYGFSYTAILFFMSKYGFDFTEKQAVLLFGGFASLSYVFNAIGGYVADKVFGIKRTM
FLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSLFKPAPTNLISRIYTDKLKLDSVYTYFYMSINMGSLSASLL
IPVLATKYGYTAAYGVCSVGFAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYIL
WFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLVYAVLFFIIYQQKSTSFFLFNVHHVNLNLFGYSVNPQSIPGVLNTA
GVIILSPILALIYTKLGKKDFSLPFKFALGILLCGLAYGSMFLACLINDPTAKVSILWEVLAITIFFSAGELLISALGLS
LMAKLLPQRITGFAMGTWFITSAIGIKIGTTIAQAVTSGIQYDESKGFDTQMTISSFHKYQDLFGYVSLVAIIFAVIAFV
IGKKLNKMIQD

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789911, Length=491, Percent_Identity=35.234215885947, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1787922, Length=491, Percent_Identity=33.4012219959267, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI1790572, Length=480, Percent_Identity=25.625, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1786927, Length=451, Percent_Identity=25.7206208425721, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 54419; Mature: 54419

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50850 MFS ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIRKQNSFFLLCFFEFFERFGYYGFSYTAILFFMSKYGFDFTEKQAVLLFGGFASLSY
CCEEEECCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHH
VFNAIGGYVADKVFGIKRTMFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
FKPAPTNLISRIYTDKLKLDSVYTYFYMSINMGSLSASLLIPVLATKYGYTAAYGVCSVG
CCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHH
FAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYIL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHH
WFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLVYAVLFFIIYQQKSTSFFLFNVHHVN
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEE
LNLFGYSVNPQSIPGVLNTAGVIILSPILALIYTKLGKKDFSLPFKFALGILLCGLAYGS
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
MFLACLINDPTAKVSILWEVLAITIFFSAGELLISALGLSLMAKLLPQRITGFAMGTWFI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSAIGIKIGTTIAQAVTSGIQYDESKGFDTQMTISSFHKYQDLFGYVSLVAIIFAVIAFV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGKKLNKMIQD
HHHHHHHHHCC
>Mature Secondary Structure
MINIRKQNSFFLLCFFEFFERFGYYGFSYTAILFFMSKYGFDFTEKQAVLLFGGFASLSY
CCEEEECCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHH
VFNAIGGYVADKVFGIKRTMFLGAVFLLVGYFSLALSPYFVNIDNYVYISLACIIVGSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
FKPAPTNLISRIYTDKLKLDSVYTYFYMSINMGSLSASLLIPVLATKYGYTAAYGVCSVG
CCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHH
FAIGILNSLLSYASIKDIGNEVDFRNMGYPRTILIVSVFIIVIIGLSVILQTNDTINYIL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHH
WFGAGLIFGVFAFQIYVEKDPSSRKKIVAAIILLVYAVLFFIIYQQKSTSFFLFNVHHVN
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEE
LNLFGYSVNPQSIPGVLNTAGVIILSPILALIYTKLGKKDFSLPFKFALGILLCGLAYGS
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
MFLACLINDPTAKVSILWEVLAITIFFSAGELLISALGLSLMAKLLPQRITGFAMGTWFI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSAIGIKIGTTIAQAVTSGIQYDESKGFDTQMTISSFHKYQDLFGYVSLVAIIFAVIAFV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGKKLNKMIQD
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA