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The map label for this gene is secB1

Identifier: 134301815

GI number: 134301815

Start: 767883

End: 768326

Strand: Reverse

Name: secB1

Synonym: FTW_0791

Alternate gene names: 134301815

Gene position: 768326-767883 (Counterclockwise)

Preceding gene: 134301816

Following gene: 134301814

Centisome position: 40.47

GC content: 30.18

Gene sequence:

>444_bases
ATGCAAAATAATGAAATCCAACCATCTTTCTTAATCCAAAAAGTGTATACAAAAGATGTTTCTTTTGAGACTATTAACTC
ACCTGCTTGTTTTAAAGAACAATGGAATCCTAGTTCTGATTTTAATATTGATATAAATACCACAAAAATAAATGATGAAA
ATTTCGAGCTAGATTTGACTATTACTGTAACCACAAAGAACAACGAAACTAATGCTTATATAGCTGAAGTTACTCAATCT
GGAATATTTACAATTACCAGCATGAGTGAAGAACAAATTGATTCTGTACTTAATACATACTGTGCAAATACCCTTTTTCC
TTATGCTAAAAGAATAATTGACTCTTCAATAATCAAAGGAGGTTTTTTACCTCTTAACCTTGCACCTATCAACTTTGATG
CAATATACTTACAAAAGAAATCTTCGCCAAAGCGTGAGCATTAA

Upstream 100 bases:

>100_bases
CTCTTTGAACTAAAAAAACGCTAATTTAATTACATAAAACTTTTTCAATTTGTTATAATTTTCCAAAACTATAAACTTTA
TAAAAGTCTTAGGGAAAATC

Downstream 100 bases:

>100_bases
TCTATTTGGATAATCAAAATCCAATCATATTGCAAAACCCTATAATTTATAATAGAATTTACCGACATACTCAGCAAATA
GTTAACTCTTAATATATTGA

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MQNNEIQPSFLIQKVYTKDVSFETINSPACFKEQWNPSSDFNIDINTTKINDENFELDLTITVTTKNNETNAYIAEVTQS
GIFTITSMSEEQIDSVLNTYCANTLFPYAKRIIDSSIIKGGFLPLNLAPINFDAIYLQKKSSPKREH

Sequences:

>Translated_147_residues
MQNNEIQPSFLIQKVYTKDVSFETINSPACFKEQWNPSSDFNIDINTTKINDENFELDLTITVTTKNNETNAYIAEVTQS
GIFTITSMSEEQIDSVLNTYCANTLFPYAKRIIDSSIIKGGFLPLNLAPINFDAIYLQKKSSPKREH
>Mature_147_residues
MQNNEIQPSFLIQKVYTKDVSFETINSPACFKEQWNPSSDFNIDINTTKINDENFELDLTITVTTKNNETNAYIAEVTQS
GIFTITSMSEEQIDSVLNTYCANTLFPYAKRIIDSSIIKGGFLPLNLAPINFDAIYLQKKSSPKREH

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=148, Percent_Identity=39.8648648648649, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB1_FRAT1 (Q14GB0)

Other databases:

- EMBL:   AM286280
- RefSeq:   YP_667567.1
- ProteinModelPortal:   Q14GB0
- SMR:   Q14GB0
- STRING:   Q14GB0
- GeneID:   4200735
- GenomeReviews:   AM286280_GR
- KEGG:   ftf:FTF1500
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   NIDVQAN
- PhylomeDB:   Q14GB0
- ProtClustDB:   PRK05751
- BioCyc:   FTUL393115:FTF1500-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 16699; Mature: 16699

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNNEIQPSFLIQKVYTKDVSFETINSPACFKEQWNPSSDFNIDINTTKINDENFELDLT
CCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEEEEE
ITVTTKNNETNAYIAEVTQSGIFTITSMSEEQIDSVLNTYCANTLFPYAKRIIDSSIIKG
EEEEECCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFLPLNLAPINFDAIYLQKKSSPKREH
CCEEEEEECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MQNNEIQPSFLIQKVYTKDVSFETINSPACFKEQWNPSSDFNIDINTTKINDENFELDLT
CCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEEEEE
ITVTTKNNETNAYIAEVTQSGIFTITSMSEEQIDSVLNTYCANTLFPYAKRIIDSSIIKG
EEEEECCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GFLPLNLAPINFDAIYLQKKSSPKREH
CCEEEEEECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA