| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
Click here to switch to the map view.
The map label for this gene is yhiQ [C]
Identifier: 134301811
GI number: 134301811
Start: 763618
End: 764343
Strand: Reverse
Name: yhiQ [C]
Synonym: FTW_0787
Alternate gene names: 134301811
Gene position: 764343-763618 (Counterclockwise)
Preceding gene: 134301812
Following gene: 134301810
Centisome position: 40.26
GC content: 29.89
Gene sequence:
>726_bases ATGCAGATAAATATTTCTAACTTAGATGTAAAGAATCACCTTGATAAATTTATAGAAGATAGATTAGAGTATGAGTTTTG CAAGCAAGATAAATACTTATACCTTGAAAATGATAATCTAAAACTTCATTATAATAATAAAGAATTATTTATAGATTTTA ATGATAGTGAAATCTTAAATAGAATAAATCCTAAAACTAAGAAATGTAGTGTTGTACAGGCAATTGAAGGTCGCTCTAAA GCTAAGCTTACCATCCTTGATACTACAGCAGGATTAGGTAGGGATACTTTCACATTAGCTGCTAGAGGCCATACTTTACT AACTCTAGAAAAAGATTCTTATCTATATCTACTACTGAAAGATGCTTTACAAAGAGCTCAACAAATAAATTATTTGAAAG AGATTGCCAATAGAATAACCTTAATCAATATAGATAGTAATGAGTATATACTTACGACTGATAAATCATTCGATTGTGTC TATGTTGACCCAATGTTTCCACCACGTAAAAAAAGTGCTAAAGTCAAACAAGGTATGCAAATCCTTCATCAAGTAGGATT TAATGATGAAGTATCTAACTCGAATTTATTAGACAACATTATCCAAACACAAATATCCCCCAAAGCTGTAGTTAAAAGAC CCATAAATGCCGAATTTCTCAGTAACAAAAAGCCAAGCTCACAGCTTAAAGGTAAGACTAATAGATTTGATATTTATAGT CTATAA
Upstream 100 bases:
>100_bases GTCATGCTGATATTTCTAGTACACAGATATACACACATTTAAATTTCCAACAACTAGCAAGCGTTTTTGATAAAGCGCAC CCTCGGGCAAAGAAAAAATA
Downstream 100 bases:
>100_bases GAAATATTAAACACTTCTTTTAGCATTAGTATATGTTGCAACAATAATTATTCCGGCGATGAACAAAAATAGTGCTGATA GCCAATAGTATAGAATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MQINISNLDVKNHLDKFIEDRLEYEFCKQDKYLYLENDNLKLHYNNKELFIDFNDSEILNRINPKTKKCSVVQAIEGRSK AKLTILDTTAGLGRDTFTLAARGHTLLTLEKDSYLYLLLKDALQRAQQINYLKEIANRITLINIDSNEYILTTDKSFDCV YVDPMFPPRKKSAKVKQGMQILHQVGFNDEVSNSNLLDNIIQTQISPKAVVKRPINAEFLSNKKPSSQLKGKTNRFDIYS L
Sequences:
>Translated_241_residues MQINISNLDVKNHLDKFIEDRLEYEFCKQDKYLYLENDNLKLHYNNKELFIDFNDSEILNRINPKTKKCSVVQAIEGRSK AKLTILDTTAGLGRDTFTLAARGHTLLTLEKDSYLYLLLKDALQRAQQINYLKEIANRITLINIDSNEYILTTDKSFDCV YVDPMFPPRKKSAKVKQGMQILHQVGFNDEVSNSNLLDNIIQTQISPKAVVKRPINAEFLSNKKPSSQLKGKTNRFDIYS L >Mature_241_residues MQINISNLDVKNHLDKFIEDRLEYEFCKQDKYLYLENDNLKLHYNNKELFIDFNDSEILNRINPKTKKCSVVQAIEGRSK AKLTILDTTAGLGRDTFTLAARGHTLLTLEKDSYLYLLLKDALQRAQQINYLKEIANRITLINIDSNEYILTTDKSFDCV YVDPMFPPRKKSAKVKQGMQILHQVGFNDEVSNSNLLDNIIQTQISPKAVVKRPINAEFLSNKKPSSQLKGKTNRFDIYS L
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0341 family
Homologues:
Organism=Escherichia coli, GI1789912, Length=219, Percent_Identity=30.1369863013699, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1504_FRAT1 (Q14GA7)
Other databases:
- EMBL: AM286280 - RefSeq: YP_667570.1 - ProteinModelPortal: Q14GA7 - SMR: Q14GA7 - STRING: Q14GA7 - GeneID: 4199881 - GenomeReviews: AM286280_GR - KEGG: ftf:FTF1504 - eggNOG: COG0500 - HOGENOM: HBG482326 - OMA: ISHIENI - PhylomeDB: Q14GA7 - ProtClustDB: CLSK935058 - BioCyc: FTUL393115:FTF1504-MONOMER - HAMAP: MF_01523 - InterPro: IPR007536
Pfam domain/function: PF04445 DUF548
EC number: NA
Molecular weight: Translated: 27825; Mature: 27825
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQINISNLDVKNHLDKFIEDRLEYEFCKQDKYLYLENDNLKLHYNNKELFIDFNDSEILN CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCEEEEEEECCHHHHH RINPKTKKCSVVQAIEGRSKAKLTILDTTAGLGRDTFTLAARGHTLLTLEKDSYLYLLLK HCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCEEEEHHH DALQRAQQINYLKEIANRITLINIDSNEYILTTDKSFDCVYVDPMFPPRKKSAKVKQGMQ HHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHH ILHQVGFNDEVSNSNLLDNIIQTQISPKAVVKRPINAEFLSNKKPSSQLKGKTNRFDIYS HHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHCCCCCCHHHCCCCCCEEEEE L C >Mature Secondary Structure MQINISNLDVKNHLDKFIEDRLEYEFCKQDKYLYLENDNLKLHYNNKELFIDFNDSEILN CEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCEEEEEEECCHHHHH RINPKTKKCSVVQAIEGRSKAKLTILDTTAGLGRDTFTLAARGHTLLTLEKDSYLYLLLK HCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCEEEEHHH DALQRAQQINYLKEIANRITLINIDSNEYILTTDKSFDCVYVDPMFPPRKKSAKVKQGMQ HHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHH ILHQVGFNDEVSNSNLLDNIIQTQISPKAVVKRPINAEFLSNKKPSSQLKGKTNRFDIYS HHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCHHHHCCCCCCHHHCCCCCCEEEEE L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA