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The map label for this gene is yciO [C]

Identifier: 134301787

GI number: 134301787

Start: 729071

End: 729685

Strand: Direct

Name: yciO [C]

Synonym: FTW_0755

Alternate gene names: 134301787

Gene position: 729071-729685 (Clockwise)

Preceding gene: 134301784

Following gene: 134301788

Centisome position: 38.4

GC content: 32.03

Gene sequence:

>615_bases
ATGAAGAGTTTAATCGAATTATATAGTTATGGTAATAATCTTTCTGAACTAAAAGAGCTTGCTAATATTTTAGATAATGA
TGGTGTTATAGCTATACCAACTGATTCTGGATATGCTTTAGCTTGTCGCATGAAATCAAAGAAAGGTATAGATAAAATTA
TCAAAATAAGAAATTTGGATAGTAGTCACAACTTTACACTTTGTTGTAAAGATTTATCAGAGATATCTGAATATGCAAAA
GTTGATAATAATGCTTATAGGTTATTAAAAAGATATACTCCTGGCCCATATACATTTATTTTAAATGCGACAAAAAAAGT
ATCATCGTTATTAGTTACTAAATCTAAGAATACGGTAGGTATTAGAGTTAGTGAGCATTACGTGCCAAGAGCAATATCAG
CTGAAATTGGCGAACCATTAGTTATCAGTAGTTTTATAGTACCTGGTCATCAGCATGTGGTTACAGACTGTGATGAGGTT
GATAGCCAGATAATGAATTATCTAGATGCGGTAGTTGAGTCAGACTATTGTGGTTATGATCCAACAACTGTTGTCGAGCT
ACTAGAATTACCATATCAAATTTTAAGACAAGGAGCAGGTGAGATAGATCTATAG

Upstream 100 bases:

>100_bases
ACACAATCGCTGGAAGCAAATCATTAATCATTTTATTCATTTTTATTAATATTAAGTGTTGTATAATAATTTTAGAAGTA
TAACGCTTGTTGTAGAAATT

Downstream 100 bases:

>100_bases
CTATTCAAATGTCTAGTAAAATCGAAAATTGAAATAAGTATAATCAATTATGAATGGTTACAAAACAATATCTGAAAATA
TAGAATTTGAAATTGCGCCA

Product: Sua5/YciO/YrdC/YwlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKSLIELYSYGNNLSELKELANILDNDGVIAIPTDSGYALACRMKSKKGIDKIIKIRNLDSSHNFTLCCKDLSEISEYAK
VDNNAYRLLKRYTPGPYTFILNATKKVSSLLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSFIVPGHQHVVTDCDEV
DSQIMNYLDAVVESDYCGYDPTTVVELLELPYQILRQGAGEIDL

Sequences:

>Translated_204_residues
MKSLIELYSYGNNLSELKELANILDNDGVIAIPTDSGYALACRMKSKKGIDKIIKIRNLDSSHNFTLCCKDLSEISEYAK
VDNNAYRLLKRYTPGPYTFILNATKKVSSLLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSFIVPGHQHVVTDCDEV
DSQIMNYLDAVVESDYCGYDPTTVVELLELPYQILRQGAGEIDL
>Mature_204_residues
MKSLIELYSYGNNLSELKELANILDNDGVIAIPTDSGYALACRMKSKKGIDKIIKIRNLDSSHNFTLCCKDLSEISEYAK
VDNNAYRLLKRYTPGPYTFILNATKKVSSLLVTKSKNTVGIRVSEHYVPRAISAEIGEPLVISSFIVPGHQHVVTDCDEV
DSQIMNYLDAVVESDYCGYDPTTVVELLELPYQILRQGAGEIDL

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=186, Percent_Identity=39.247311827957, Blast_Score=163, Evalue=7e-42,
Organism=Drosophila melanogaster, GI78707274, Length=117, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 22698; Mature: 22698

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLIELYSYGNNLSELKELANILDNDGVIAIPTDSGYALACRMKSKKGIDKIIKIRNLD
CHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCC
SSHNFTLCCKDLSEISEYAKVDNNAYRLLKRYTPGPYTFILNATKKVSSLLVTKSKNTVG
CCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEE
IRVSEHYVPRAISAEIGEPLVISSFIVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYD
EEECCCCCCCHHHHHCCCCEEEHHEECCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PTTVVELLELPYQILRQGAGEIDL
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKSLIELYSYGNNLSELKELANILDNDGVIAIPTDSGYALACRMKSKKGIDKIIKIRNLD
CHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHCCC
SSHNFTLCCKDLSEISEYAKVDNNAYRLLKRYTPGPYTFILNATKKVSSLLVTKSKNTVG
CCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCEEE
IRVSEHYVPRAISAEIGEPLVISSFIVPGHQHVVTDCDEVDSQIMNYLDAVVESDYCGYD
EEECCCCCCCHHHHHCCCCEEEHHEECCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PTTVVELLELPYQILRQGAGEIDL
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]