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The map label for this gene is ycaR [C]

Identifier: 134301678

GI number: 134301678

Start: 611748

End: 611936

Strand: Direct

Name: ycaR [C]

Synonym: FTW_0619

Alternate gene names: 134301678

Gene position: 611748-611936 (Clockwise)

Preceding gene: 134301677

Following gene: 134301679

Centisome position: 32.22

GC content: 29.63

Gene sequence:

>189_bases
ATGGATCATTCAGTTTTAAATGTGTTGGTTTGCCCAATTTGTAAGGCAAATTTATATTATGATAAAGAAAATCAAGTTTT
AGTATGTAAAGCGGATAAATTGGCTTATCCAATTCGTGAAAATATACCAGTAATGTTGGTTGAAGAAGCTAAAAAAATGA
CTCTTGAAGAGGTGAAAAAATATGGCTAA

Upstream 100 bases:

>100_bases
ACGATTCATGATATCCTAGTATTCTAAGATAAATGACTATATGCTTGTCAAAGTAGATCATCTAGGAGATAAGTATTCAA
TTTATAACAGAGGTGAAATA

Downstream 100 bases:

>100_bases
TATCCATATTGTAATTCCTGCCAGGCTTAAATCAACTCGTCTACCAAATAAAATGCTGGCAGATATTGCCGGTAAGCCAA
TGATTCAGAGAGTCTATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKKYG

Sequences:

>Translated_62_residues
MDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKKYG
>Mature_62_residues
MDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKKYG

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=60, Percent_Identity=46.6666666666667, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1362_FRATO (Q0BL47)

Other databases:

- EMBL:   CP000437
- RefSeq:   YP_763824.1
- ProteinModelPortal:   Q0BL47
- SMR:   Q0BL47
- STRING:   Q0BL47
- GeneID:   4307765
- GenomeReviews:   CP000437_GR
- KEGG:   fth:FTH_1362
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK986379
- BioCyc:   FTUL393011:FTH_1362-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 7143; Mature: 7143

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKK
CCCCHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCHHHCCHHHHHC
YG
CC
>Mature Secondary Structure
MDHSVLNVLVCPICKANLYYDKENQVLVCKADKLAYPIRENIPVMLVEEAKKMTLEEVKK
CCCCHHHHHHCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCEEEECCHHHCCHHHHHC
YG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA