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The map label for this gene is nusG [H]

Identifier: 134301348

GI number: 134301348

Start: 236358

End: 236891

Strand: Direct

Name: nusG [H]

Synonym: FTW_0229

Alternate gene names: 134301348

Gene position: 236358-236891 (Clockwise)

Preceding gene: 162329653

Following gene: 134301349

Centisome position: 12.45

GC content: 38.58

Gene sequence:

>534_bases
ATGCTTTGGTATGTTGTGCAGGTGCACTCAGGTTACGAAAAAAGAGTGAAAGCTCAGCTTGAAGAAAATATCGAGATAGC
TGGATTGAAAAATAACTTTGGCAGAATTCTTGTTCCTACTGAAAATGTGGTTGAGATGAAAGGTGGGCAAAAGCGTAAGA
GCGAAAGAAAATATTTTCCAGGCTATGTTTTGATTGAGGCTGATTTATCAACAGATGCTTGGAATCTTGTTAAATCGGTT
CCACGTGTGCTAACTGTTGTTGGTTCTAAGGGTAAGCCGATACCTTTGAGCAAAGCGGAAGTAGATAGAATATTAGATTT
TGTCGAAGGAAGTAAATCCACTGTAGAGCCAAGATTGAGAAAATCTTATCACGTTGGTGAAGTTGTTCGAGTCCTAGAAG
GACCATTTAATGACTTTACTGGCGTTATTGAAGAAGTTAACTATGAGAAATCAAGGTTAAGGGTTGCAGTGTCTATCTTT
GGTAGATCTACGCCTGTTGAGCTTGAGTTTTCTCAAGTTGAAAAAGAATCTTAG

Upstream 100 bases:

>100_bases
GATAGTTGTGGTAATAATTTTTGCGCTGATAATATCTTTATTTGGTATTATATTTGAGAATTTTATTCAGTATTTTCTGG
GTTAATAAAGGGATATAAGT

Downstream 100 bases:

>100_bases
TGTTCAACTAAGATATTGGGGAGCTTATATTCATTATAAGTGCTATTAACCTAAATTTGGAGAAAAAAATGGCTAAGAAA
AAAATAGAAGCTATTATTAA

Product: transcription termination factor NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFPGYVLIEADLSTDAWNLVKSV
PRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLRKSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIF
GRSTPVELEFSQVEKES

Sequences:

>Translated_177_residues
MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFPGYVLIEADLSTDAWNLVKSV
PRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLRKSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIF
GRSTPVELEFSQVEKES
>Mature_177_residues
MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFPGYVLIEADLSTDAWNLVKSV
PRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLRKSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIF
GRSTPVELEFSQVEKES

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=176, Percent_Identity=54.5454545454545, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20040; Mature: 20040

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFP
CEEEEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEECCCCEEECCCCCCCCCCCCCCC
GYVLIEADLSTDAWNLVKSVPRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLR
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
KSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIFGRSTPVELEFSQVEKES
HHCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEEEEEECCCCCCEEEHHHCCCCC
>Mature Secondary Structure
MLWYVVQVHSGYEKRVKAQLEENIEIAGLKNNFGRILVPTENVVEMKGGQKRKSERKYFP
CEEEEEEECCCHHHHHHHHHHCCEEEEEECCCCCEEEECCCCEEECCCCCCCCCCCCCCC
GYVLIEADLSTDAWNLVKSVPRVLTVVGSKGKPIPLSKAEVDRILDFVEGSKSTVEPRLR
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHH
KSYHVGEVVRVLEGPFNDFTGVIEEVNYEKSRLRVAVSIFGRSTPVELEFSQVEKES
HHCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEEEEEECCCCCCEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]