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The map label for this gene is yggW [C]

Identifier: 134301299

GI number: 134301299

Start: 171091

End: 172233

Strand: Reverse

Name: yggW [C]

Synonym: FTW_0161

Alternate gene names: 134301299

Gene position: 172233-171091 (Counterclockwise)

Preceding gene: 134301300

Following gene: 134301285

Centisome position: 9.07

GC content: 30.62

Gene sequence:

>1143_bases
ATGTTTGAAATCAACAAACAAATTGGAATTTATATCCATTTTCCTTGGTGCGTGCGTAAATGCCCGTACTGTGACTTTAA
CTCTCATCCAATAAAAGATGATAGCTATCTTTCAGAACAATATTATCAAAAACTTATAGCCGATTTTGATACTCATCTTG
ATGATTTACAAGCTAGAGAAGTTATAAGTATTTTTATTGGTGGTGGCACTCCTTCTCTGTTTAAAGCTGAGTACCTTGAT
AAAGTTTTACAACATATTACTAAAAATACAAAAATTAGCATTAATTGTGAAATAACTTTAGAAATGAATCCAGGAACAGT
AGAGAGAGGTTCAATACTAAGTTATCAAAATATTGGAATTAATAGGATATCGCTTGGGGTGCAAAGCTTTCAAGATGATA
AACTAAAAATTTTGGGAAGAATTCATAATTGCAAAAATGTTTATACTACTATTGATGAAATCAAAAACTCAAAAATCTCT
AATTTCAATATTGATATAATGCATGGACTCCCAAATCAAAGCTTTGATGATGGTATTTTTGATATAACTCAAGCCATAGC
AATGCAACCAACACATATTTCTTGGTATCAACTTACTATTGAGCCTAATACATTATTTGCAGCAAAACGACCAAAACTCC
CTGATGAAGAAATTCTTGAAAGTATTGAAATAGCCGGCAAAGAGGCTCTTGCACATGCAGGTTTTAAACAATACGAAGTT
TCTGCTTTTGCCAAAAATACGCTAAGATCTATTCATAATTCTAATTACTGGATGTTTGGCGATTATATAGGCATTGGCGC
TGGAGCGCATAGCAAGATTACCAATCTTAAAACCAAACAAATCAAAAGAGTTTGGAAACATAAACACCCTAAGATATATA
CTCAAACTGATAAATTTATCAAAGACTCAAACATAGTTACCCAAGATGAGATTATATATGAGTTTATGCTTAATACTCTA
AGATTAAAAAATGGTTTTAAACTTAGTGAGTTTGAACAACAAACTTTTTTATCAAGCAATATTATTAGCCAAAAGTTACA
ATTAGGTATTGATAAAGGGCTCTTAGAACTAAATGCTAATCAAATCAAACCAACAGCCAAAGGTTATCTATTTTTAAATG
ACTGTATTAATATTTTTAGCTAA

Upstream 100 bases:

>100_bases
TTAAAAATACAATACCTACTAGCTTTATTCATAACTATGGGGCTAGTTGCGGTATATACTTTTGTTGTAAGTAAATTTTT
AATCTTCAAGGCGTAAAATA

Downstream 100 bases:

>100_bases
TCATCATAACTTATCTGTGAAATTTTACCACTGACTGCATCGACCAAAACTTCAACTTGTTGACTATTAGCATCTAGACA
CTCAACCTTATATGCTCCAT

Product: putative oxygen-independent coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MFEINKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIGGGTPSLFKAEYLD
KVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGVQSFQDDKLKILGRIHNCKNVYTTIDEIKNSKIS
NFNIDIMHGLPNQSFDDGIFDITQAIAMQPTHISWYQLTIEPNTLFAAKRPKLPDEEILESIEIAGKEALAHAGFKQYEV
SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQTDKFIKDSNIVTQDEIIYEFMLNTL
RLKNGFKLSEFEQQTFLSSNIISQKLQLGIDKGLLELNANQIKPTAKGYLFLNDCINIFS

Sequences:

>Translated_380_residues
MFEINKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIGGGTPSLFKAEYLD
KVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGVQSFQDDKLKILGRIHNCKNVYTTIDEIKNSKIS
NFNIDIMHGLPNQSFDDGIFDITQAIAMQPTHISWYQLTIEPNTLFAAKRPKLPDEEILESIEIAGKEALAHAGFKQYEV
SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQTDKFIKDSNIVTQDEIIYEFMLNTL
RLKNGFKLSEFEQQTFLSSNIISQKLQLGIDKGLLELNANQIKPTAKGYLFLNDCINIFS
>Mature_380_residues
MFEINKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQAREVISIFIGGGTPSLFKAEYLD
KVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGINRISLGVQSFQDDKLKILGRIHNCKNVYTTIDEIKNSKIS
NFNIDIMHGLPNQSFDDGIFDITQAIAMQPTHISWYQLTIEPNTLFAAKRPKLPDEEILESIEIAGKEALAHAGFKQYEV
SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQTDKFIKDSNIVTQDEIIYEFMLNTL
RLKNGFKLSEFEQQTFLSSNIISQKLQLGIDKGLLELNANQIKPTAKGYLFLNDCINIFS

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=273, Percent_Identity=34.7985347985348, Blast_Score=182, Evalue=5e-46,
Organism=Escherichia coli, GI1789325, Length=372, Percent_Identity=43.2795698924731, Blast_Score=324, Evalue=5e-90,
Organism=Escherichia coli, GI87082341, Length=394, Percent_Identity=21.0659898477157, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43577; Mature: 43577

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEINKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQARE
CEEECCEEEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
VISIFIGGGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGI
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCC
NRISLGVQSFQDDKLKILGRIHNCKNVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIF
EEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH
DITQAIAMQPTHISWYQLTIEPNTLFAAKRPKLPDEEILESIEIAGKEALAHAGFKQYEV
HHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQTDKFI
HHHHHHHHHHHHCCCEEEEECEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEECCHHHH
KDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQKLQLGIDKGLLELNAN
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
QIKPTAKGYLFLNDCINIFS
CCCCCCCCEEEHHHHHHHCC
>Mature Secondary Structure
MFEINKQIGIYIHFPWCVRKCPYCDFNSHPIKDDSYLSEQYYQKLIADFDTHLDDLQARE
CEEECCEEEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
VISIFIGGGTPSLFKAEYLDKVLQHITKNTKISINCEITLEMNPGTVERGSILSYQNIGI
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCEEEECCCCC
NRISLGVQSFQDDKLKILGRIHNCKNVYTTIDEIKNSKISNFNIDIMHGLPNQSFDDGIF
EEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH
DITQAIAMQPTHISWYQLTIEPNTLFAAKRPKLPDEEILESIEIAGKEALAHAGFKQYEV
HHHHHHHCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
SAFAKNTLRSIHNSNYWMFGDYIGIGAGAHSKITNLKTKQIKRVWKHKHPKIYTQTDKFI
HHHHHHHHHHHHCCCEEEEECEEEECCCCCHHHHCCHHHHHHHHHHCCCCEEEECCHHHH
KDSNIVTQDEIIYEFMLNTLRLKNGFKLSEFEQQTFLSSNIISQKLQLGIDKGLLELNAN
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCC
QIKPTAKGYLFLNDCINIFS
CCCCCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]